Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD4P01730 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD4P01730 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD4P01730 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CD4P01730 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD4P01730 AC093591.2-201ENST00000565254 3843 ntBASIC5.31□□□□□ -1.56
CD4P01730 AL049737.1-201ENST00000413920 1403 ntBASIC5.31□□□□□ -1.56
CD4P01730 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.31□□□□□ -1.56
CD4P01730 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD4P01730 AC025574.1-201ENST00000554784 1653 ntBASIC5.31□□□□□ -1.56
CD4P01730 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CD4P01730 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.3□□□□□ -1.56
CD4P01730 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.3□□□□□ -1.56
CD4P01730 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.3□□□□□ -1.56
CD4P01730 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 AL353743.4-201ENST00000422653 1547 ntBASIC5.3□□□□□ -1.56
CD4P01730 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.3□□□□□ -1.56
CD4P01730 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 RNU6-543P-201ENST00000362576 108 ntBASIC5.3□□□□□ -1.56
CD4P01730 RNA5SP388-201ENST00000362584 119 ntBASIC5.3□□□□□ -1.56
CD4P01730 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD4P01730 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CD4P01730 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.3□□□□□ -1.56
CD4P01730 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.3□□□□□ -1.56
CD4P01730 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.3□□□□□ -1.56
CD4P01730 UQCRBP1-201ENST00000421129 336 ntBASIC5.3□□□□□ -1.56
CD4P01730 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.3□□□□□ -1.56
CD4P01730 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.3□□□□□ -1.56
CD4P01730 AC239367.2-201ENST00000447309 705 ntBASIC5.3□□□□□ -1.56
CD4P01730 AL162591.2-201ENST00000449634 317 ntBASIC5.3□□□□□ -1.56
CD4P01730 HPRT1P2-201ENST00000505250 544 ntBASIC5.3□□□□□ -1.56
CD4P01730 Y_RNA.719-201ENST00000517156 106 ntBASIC5.3□□□□□ -1.56
CD4P01730 AP003355.1-201ENST00000518956 587 ntBASIC5.3□□□□□ -1.56
CD4P01730 OR8A2P-201ENST00000528631 952 ntBASIC5.3□□□□□ -1.56
CD4P01730 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.3□□□□□ -1.56
CD4P01730 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.3□□□□□ -1.56
CD4P01730 GLRXP2-201ENST00000555594 321 ntBASIC5.3□□□□□ -1.56
CD4P01730 AC105129.1-201ENST00000560250 297 ntBASIC5.3□□□□□ -1.56
CD4P01730 AC104072.1-201ENST00000568817 668 ntBASIC5.3□□□□□ -1.56
CD4P01730 AC023575.1-201ENST00000580510 358 ntBASIC5.3□□□□□ -1.56
CD4P01730 MIR4660-201ENST00000583549 74 ntBASIC5.3□□□□□ -1.56
CD4P01730 AL121932.1-201ENST00000605542 214 ntBASIC5.3□□□□□ -1.56
CD4P01730 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.3□□□□□ -1.56
CD4P01730 AC090948.2-201ENST00000607363 564 ntBASIC5.3□□□□□ -1.56
CD4P01730 BNIP3P41-202ENST00000616656 861 ntBASIC5.3□□□□□ -1.56
CD4P01730 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 AL138955.1-201ENST00000622881 1040 ntBASIC5.3□□□□□ -1.56
CD4P01730 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.3□□□□□ -1.56
CD4P01730 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 AC009951.1-201ENST00000623674 2614 ntBASIC5.3□□□□□ -1.56
CD4P01730 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CD4P01730 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CD4P01730 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD4P01730 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.3□□□□□ -1.56
CD4P01730 AL442639.1-201ENST00000625030 1899 ntBASIC5.3□□□□□ -1.56
CD4P01730 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.3□□□□□ -1.56
CD4P01730 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD4P01730 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.3□□□□□ -1.56
CD4P01730 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CD4P01730 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.29□□□□□ -1.56
CD4P01730 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CD4P01730 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CD4P01730 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 MAPK10-304ENST00000641341 3984 ntBASIC5.29□□□□□ -1.56
CD4P01730 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.29□□□□□ -1.56
CD4P01730 AC120338.1-201ENST00000625074 1541 ntBASIC5.29□□□□□ -1.56
CD4P01730 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.29□□□□□ -1.56
CD4P01730 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CD4P01730 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CD4P01730 RNU6-1339P-201ENST00000363574 91 ntBASIC5.29□□□□□ -1.56
CD4P01730 RNA5SP509-201ENST00000364577 119 ntBASIC5.29□□□□□ -1.56
CD4P01730 BMS1P3-201ENST00000372011 932 ntBASIC5.29□□□□□ -1.56
CD4P01730 SNORA51.12-201ENST00000384448 134 ntBASIC5.29□□□□□ -1.56
CD4P01730 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 DNAJC19P6-201ENST00000401853 280 ntBASIC5.29□□□□□ -1.56
CD4P01730 AC007738.1-201ENST00000413892 348 ntBASIC5.29□□□□□ -1.56
CD4P01730 AL445183.3-201ENST00000414168 502 ntBASIC5.29□□□□□ -1.56
CD4P01730 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.29□□□□□ -1.56
CD4P01730 AC013429.2-201ENST00000418798 781 ntBASIC5.29□□□□□ -1.56
CD4P01730 LINC00993-201ENST00000420453 540 ntBASIC5.29□□□□□ -1.56
CD4P01730 DEFB130D-201ENST00000426866 237 ntBASIC5.29□□□□□ -1.56
CD4P01730 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.29□□□□□ -1.56
CD4P01730 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD4P01730 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.29□□□□□ -1.56
CD4P01730 RPS7P5-201ENST00000441482 581 ntBASIC5.29□□□□□ -1.56
CD4P01730 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.29□□□□□ -1.56
CD4P01730 PTMAP3-201ENST00000447474 330 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms