Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AF228730.2-201ENST00000438784 848 ntBASIC1.65□□□□□ -2.14
MACF1Q9UPN3 IGKV2-38-201ENST00000517443 247 ntBASIC1.65□□□□□ -2.14
MACF1Q9UPN3 RANP9-201ENST00000519957 271 ntBASIC1.65□□□□□ -2.14
MACF1Q9UPN3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.65□□□□□ -2.14
MACF1Q9UPN3 MIR5004-201ENST00000579078 107 ntBASIC1.65□□□□□ -2.14
MACF1Q9UPN3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
MACF1Q9UPN3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
MACF1Q9UPN3 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.14
MACF1Q9UPN3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
MACF1Q9UPN3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC006116.10-201ENST00000591836 581 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC126118.1-201ENST00000607744 628 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC010632.3-201ENST00000611377 369 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AF001550.2-201ENST00000636643 217 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 FP325313.1-201ENST00000638228 703 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 CDY11P-201ENST00000447168 1651 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RPL7P26-201ENST00000333817 754 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 MTCO1P42-201ENST00000457379 726 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 HMGB1P21-201ENST00000502313 581 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RNA5SP337-201ENST00000517007 109 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC069240.1-201ENST00000548774 375 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 MAPK10-372ENST00000641954 3413 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RNA5SP50-201ENST00000363731 107 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RNA5SP306-201ENST00000411087 107 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RPS27AP9-201ENST00000477681 438 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RPL29P14-201ENST00000495837 428 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RNA5SP497-201ENST00000516081 97 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RNU6-352P-201ENST00000516908 107 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AP003175.1-201ENST00000641383 6658 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AL136164.3-201ENST00000624429 3978 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AL353093.1-201ENST00000441292 436 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 TXNP1-201ENST00000441872 371 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 RPL7P36-201ENST00000444633 681 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AC116553.2-201ENST00000564203 463 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
MACF1Q9UPN3 AL591135.1-201ENST00000401578 5914 ntBASIC1.65□□□□□ -2.15
MACF1Q9UPN3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
MACF1Q9UPN3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
MACF1Q9UPN3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
MACF1Q9UPN3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
MACF1Q9UPN3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
MACF1Q9UPN3 RNU6-729P-201ENST00000384399 107 ntBASIC1.64□□□□□ -2.15
MACF1Q9UPN3 RPL23AP46-201ENST00000438548 490 ntBASIC1.64□□□□□ -2.15
MACF1Q9UPN3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.64□□□□□ -2.15
MACF1Q9UPN3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC1.64□□□□□ -2.15
MACF1Q9UPN3 AC010201.1-201ENST00000605051 540 ntBASIC1.64□□□□□ -2.15
MACF1Q9UPN3 AC005539.1-201ENST00000443768 1479 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms