Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 RPS3AP14-201ENST00000483907 780 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC010486.1-201ENST00000511793 424 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC138932.5-201ENST00000617759 563 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AF001550.2-201ENST00000636643 217 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC068870.3-201ENST00000625077 2536 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AF117829.1-206ENST00000621883 3802 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC003985.2-201ENST00000562268 1669 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AL442128.2-201ENST00000620246 1824 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 IGKV2-38-201ENST00000517443 247 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC027176.2-201ENST00000559166 746 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 OR56B2P-201ENST00000317102 954 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 SNORA48.5-201ENST00000391143 135 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 FCF1P7-201ENST00000451185 558 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AC112206.1-201ENST00000468416 477 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AC069304.1-201ENST00000491593 704 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 CYCSP30-201ENST00000546447 172 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 NPM1P5-201ENST00000557228 838 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AC138907.10-201ENST00000623708 983 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AC097461.1-201ENST00000568928 2821 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AL136164.3-201ENST00000624429 3978 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 NAP1L4P1-201ENST00000319092 1157 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 HSPD1P21-201ENST00000436541 245 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 RPL21P23-201ENST00000446654 460 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AC018635.1-201ENST00000468292 1030 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 BDH2P1-201ENST00000602288 736 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 MIR432-201ENST00000606207 94 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 RNA5SP439-201ENST00000617595 124 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 AL049781.1-201ENST00000623195 3585 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 CDY11P-201ENST00000447168 1651 ntBASIC2.74□□□□□ -1.97
CSMD3Q7Z407 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD3Q7Z407 RNA5SP399-201ENST00000364003 117 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 DNAJA1P1-201ENST00000425106 1187 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC097462.2-201ENST00000504623 481 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 FRG1EP-201ENST00000634469 770 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 CA1-225ENST00000626824 2405 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms