Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 MIR1269B-201ENST00000580405 75 ntBASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 AC021646.1-201ENST00000605469 484 ntBASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 AL080274.1-201ENST00000605565 220 ntBASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 AC104184.1-201ENST00000607513 721 ntBASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 AL023806.3-201ENST00000638502 2704 ntBASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 AL121768.1-201ENST00000613917 2544 ntBASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PRPF38BQ5VTL8 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 MFSD8-218ENST00000641186 4448 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 RNU4-1-201ENST00000363925 141 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AL356057.3-201ENST00000402607 340 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 RNU2-39P-201ENST00000410604 198 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 Y_RNA.615-201ENST00000410769 117 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 PRUNEP1-201ENST00000425846 705 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 RPL36AP15-201ENST00000444514 266 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 RPL23AP28-201ENST00000448062 470 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AL445665.1-202ENST00000452436 324 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 EIF3KP3-201ENST00000514461 639 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 Y_RNA.667-201ENST00000516212 107 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 RNU6-410P-201ENST00000517006 107 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 RPL10P18-201ENST00000519384 309 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AC107934.1-201ENST00000522215 217 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AP003072.2-201ENST00000527756 676 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AC015801.1-201ENST00000585651 153 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 DPPA3P3-201ENST00000603842 430 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AL355472.4-201ENST00000610233 626 ntBASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PRPF38BQ5VTL8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 MRE11P1-201ENST00000464884 2127 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC007823.1-201ENST00000569932 1566 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 RNA5SP273-201ENST00000362484 113 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms