Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC091178.1-203ENST00000584586 279 ntBASIC3.42□□□□□ -1.86
CD28P10747 AC005520.3-201ENST00000602874 370 ntBASIC3.42□□□□□ -1.86
CD28P10747 AC079587.1-201ENST00000603846 277 ntBASIC3.42□□□□□ -1.86
CD28P10747 IMMP1LP1-201ENST00000605170 488 ntBASIC3.42□□□□□ -1.86
CD28P10747 AL591034.3-201ENST00000605511 685 ntBASIC3.42□□□□□ -1.86
CD28P10747 AC090948.2-201ENST00000607363 564 ntBASIC3.42□□□□□ -1.86
CD28P10747 MIR6891-201ENST00000618788 93 ntBASIC3.42□□□□□ -1.86
CD28P10747 AL133370.2-201ENST00000619934 439 ntBASIC3.42□□□□□ -1.86
CD28P10747 RPL23AP61-201ENST00000623642 466 ntBASIC3.42□□□□□ -1.86
CD28P10747 AP002967.1-201ENST00000624203 539 ntBASIC3.42□□□□□ -1.86
CD28P10747 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CD28P10747 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CD28P10747 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.42□□□□□ -1.86
CD28P10747 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD28P10747 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD28P10747 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CD28P10747 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.42□□□□□ -1.86
CD28P10747 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.42□□□□□ -1.86
CD28P10747 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CD28P10747 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.42□□□□□ -1.86
CD28P10747 AC092079.1-201ENST00000558620 1985 ntBASIC3.42□□□□□ -1.86
CD28P10747 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CD28P10747 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD28P10747 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD28P10747 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CD28P10747 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CD28P10747 DDX18P3-201ENST00000404856 2007 ntBASIC3.41□□□□□ -1.86
CD28P10747 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD28P10747 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CD28P10747 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
CD28P10747 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD28P10747 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CD28P10747 IL6STP1-201ENST00000346911 1020 ntBASIC3.41□□□□□ -1.86
CD28P10747 RNU6-386P-201ENST00000362650 107 ntBASIC3.41□□□□□ -1.86
CD28P10747 RNU6-618P-201ENST00000363518 112 ntBASIC3.41□□□□□ -1.86
CD28P10747 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.41□□□□□ -1.86
CD28P10747 SNORA37-201ENST00000384504 129 ntBASIC3.41□□□□□ -1.86
CD28P10747 AL022722.2-201ENST00000402519 180 ntBASIC3.41□□□□□ -1.86
CD28P10747 RNA5SP317-201ENST00000410176 116 ntBASIC3.41□□□□□ -1.86
CD28P10747 RNU6-564P-201ENST00000410983 104 ntBASIC3.41□□□□□ -1.86
CD28P10747 RNA5SP311-201ENST00000411290 116 ntBASIC3.41□□□□□ -1.86
CD28P10747 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.41□□□□□ -1.86
CD28P10747 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.41□□□□□ -1.86
CD28P10747 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.41□□□□□ -1.86
CD28P10747 OR4C10P-201ENST00000434991 931 ntBASIC3.41□□□□□ -1.86
CD28P10747 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.41□□□□□ -1.86
CD28P10747 AC122718.1-201ENST00000439448 744 ntBASIC3.41□□□□□ -1.86
CD28P10747 UBE2V1P3-201ENST00000439651 417 ntBASIC3.41□□□□□ -1.86
CD28P10747 AC073587.1-201ENST00000447093 876 ntBASIC3.41□□□□□ -1.86
CD28P10747 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 AC022431.1-201ENST00000450941 438 ntBASIC3.41□□□□□ -1.86
CD28P10747 AC005008.1-201ENST00000456151 612 ntBASIC3.41□□□□□ -1.86
CD28P10747 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.41□□□□□ -1.86
CD28P10747 FAM133DP-201ENST00000464802 691 ntBASIC3.41□□□□□ -1.86
CD28P10747 RPL23AP37-201ENST00000479658 549 ntBASIC3.41□□□□□ -1.86
CD28P10747 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 ARL4AP1-201ENST00000503220 705 ntBASIC3.41□□□□□ -1.86
CD28P10747 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.41□□□□□ -1.86
CD28P10747 ATP1B1P1-201ENST00000509767 915 ntBASIC3.41□□□□□ -1.86
CD28P10747 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.41□□□□□ -1.86
CD28P10747 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.41□□□□□ -1.86
CD28P10747 RNA5SP315-201ENST00000516340 116 ntBASIC3.41□□□□□ -1.86
CD28P10747 RNA5SP312-201ENST00000517068 116 ntBASIC3.41□□□□□ -1.86
CD28P10747 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.41□□□□□ -1.86
CD28P10747 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.41□□□□□ -1.86
CD28P10747 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CD28P10747 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.41□□□□□ -1.86
CD28P10747 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.41□□□□□ -1.86
CD28P10747 AC023762.1-201ENST00000603280 584 ntBASIC3.41□□□□□ -1.86
CD28P10747 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 COX6CP4-201ENST00000605798 228 ntBASIC3.41□□□□□ -1.86
CD28P10747 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CD28P10747 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CD28P10747 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CD28P10747 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CD28P10747 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CD28P10747 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CD28P10747 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.4□□□□□ -1.86
CD28P10747 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.4□□□□□ -1.86
CD28P10747 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.4□□□□□ -1.86
CD28P10747 MAPK10-349ENST00000641767 3661 ntBASIC3.4□□□□□ -1.86
CD28P10747 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CD28P10747 LARP1BP1-201ENST00000506036 1359 ntBASIC3.4□□□□□ -1.86
CD28P10747 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CD28P10747 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CD28P10747 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CD28P10747 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CD28P10747 RNA5SP388-201ENST00000362584 119 ntBASIC3.4□□□□□ -1.87
CD28P10747 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 RNU1-63P-201ENST00000383902 164 ntBASIC3.4□□□□□ -1.87
CD28P10747 RNU1-13P-201ENST00000384499 162 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms