Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 UGT2B27P-201ENST00000505092 1620 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC093909.5-201ENST00000621839 1799 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 Z99129.4-201ENST00000624649 2435 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC093278.2-201ENST00000564956 2485 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 Y_RNA.46-201ENST00000362695 102 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 SET-203ENST00000372688 801 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 Y_RNA.489-201ENST00000384410 101 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 RNU6-316P-201ENST00000391027 107 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 RN7SKP281-201ENST00000410472 352 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 OFD1P1Y-201ENST00000411756 1225 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 RPS15AP9-201ENST00000439856 381 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AL035666.1-201ENST00000446195 348 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC104651.2-201ENST00000447549 528 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC107399.1-201ENST00000451226 265 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 RPL7P15-201ENST00000461190 712 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC023194.2-201ENST00000465398 406 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 RPL12P31-201ENST00000478433 450 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 DUBR-205ENST00000495228 411 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 HMGB1P19-201ENST00000517578 577 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AL121579.2-201ENST00000555466 590 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 MIR5186-201ENST00000577504 120 ntBASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.93□□□□□ -0.98
PHF8Q9UPP1 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 AC083806.2-201ENST00000617795 2685 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 RNA5SP110-201ENST00000362638 115 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 RNU6-996P-201ENST00000365438 107 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 OR52E6-202ENST00000379946 954 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 RNU6-1032P-201ENST00000384100 107 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 MIR130B-202ENST00000385018 82 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 RNU6-370P-201ENST00000411008 104 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 AC244452.1-201ENST00000413798 141 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 RPL12P12-201ENST00000424633 501 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 AL353777.1-201ENST00000425552 326 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC8.92□□□□□ -0.98
PHF8Q9UPP1 RPS3AP54-201ENST00000435535 734 ntBASIC8.92□□□□□ -0.98
PHF8Q9UPP1 RPL23AP19-201ENST00000436229 369 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms