Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL079305.1-201ENST00000623159 3008 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AC092162.1-201ENST00000432828 434 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AC023271.1-201ENST00000445936 1090 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 MUC2-202ENST00000613187 4845 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AL035079.1-201ENST00000405210 287 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 BTF3P6-201ENST00000448054 499 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 CYCSP35-201ENST00000451978 304 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AC097462.2-201ENST00000504623 481 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 RNA5SP360-201ENST00000516555 118 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AC092709.1-201ENST00000521355 1045 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHD8Q9HCK8 PRPF19P1-201ENST00000584766 898 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 AL645927.2-201ENST00000618350 349 ntBASIC3.91□□□□□ -1.78
CHD8Q9HCK8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 RN7SKP182-201ENST00000410772 298 ntBASIC3.9□□□□□ -1.78
CHD8Q9HCK8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.9□□□□□ -1.78
CHD8Q9HCK8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 S100A11P2-201ENST00000467589 312 ntBASIC3.9□□□□□ -1.78
CHD8Q9HCK8 MIR5684-201ENST00000585074 65 ntBASIC3.9□□□□□ -1.78
CHD8Q9HCK8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHD8Q9HCK8 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.9□□□□□ -1.79
CHD8Q9HCK8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 SNORA60-201ENST00000362396 134 ntBASIC3.9□□□□□ -1.79
CHD8Q9HCK8 RNU1-20P-201ENST00000363314 162 ntBASIC3.9□□□□□ -1.79
CHD8Q9HCK8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 MIR8057-201ENST00000620957 69 ntBASIC3.9□□□□□ -1.79
CHD8Q9HCK8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHD8Q9HCK8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 LINC00561-201ENST00000565815 2738 ntBASIC3.89□□□□□ -1.79
CHD8Q9HCK8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 RNF19BPX-201ENST00000426224 625 ntBASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AC093166.2-201ENST00000455969 1017 ntBASIC3.89□□□□□ -1.79
CHD8Q9HCK8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AL034351.1-201ENST00000605288 668 ntBASIC3.89□□□□□ -1.79
CHD8Q9HCK8 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.89□□□□□ -1.79
CHD8Q9HCK8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 MAPK10-338ENST00000641647 3362 ntBASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 OR11H4-201ENST00000315409 1082 ntBASIC3.89□□□□□ -1.79
CHD8Q9HCK8 RN7SKP185-201ENST00000362813 326 ntBASIC3.89□□□□□ -1.79
CHD8Q9HCK8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD8Q9HCK8 AC015804.1-201ENST00000622935 435 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms