Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 C22orf46-201ENST00000402966 4975 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 PLS1-202ENST00000457734 3706 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AL096869.3-201ENST00000567837 2626 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CXorf36-202ENST00000398000 4655 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CARMN-201ENST00000505254 3950 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 C4BPAP1-201ENST00000415474 1893 ntBASIC5.03□□□□□ -1.6
KRTAP3-3Q9BYR6 SERINC3-202ENST00000342374 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
KRTAP3-3Q9BYR6 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 SP110-215ENST00000540870 2032 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 PPM1K-210ENST00000608933 6484 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 TOP3A-208ENST00000542570 4116 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RSPH3-202ENST00000367069 6561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC097382.2-201ENST00000500031 4300 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 PCDHGA10-201ENST00000398610 4617 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ELOB-201ENST00000262306 582 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 FUNDC2P1-201ENST00000327891 570 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 MYL4-201ENST00000354968 907 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU6-271P-201ENST00000363858 105 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU6-524P-201ENST00000384270 107 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU6-411P-201ENST00000384451 107 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 GPR55-202ENST00000392040 3828 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 Z98745.1-201ENST00000402553 494 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RPL13AP17-202ENST00000421208 581 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AL353705.1-201ENST00000433468 480 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC022748.1-201ENST00000434914 392 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AL121890.1-201ENST00000435457 205 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RPL18AP7-201ENST00000435924 524 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC108488.1-205ENST00000438482 914 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 MT1JP-201ENST00000444023 186 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC073135.1-201ENST00000451150 775 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL648P-201ENST00000478418 301 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RPL12P30-201ENST00000488389 499 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RPS3P7-201ENST00000488662 726 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC093729.1-201ENST00000513074 128 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORA31.23-201ENST00000517219 133 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 SEBOX-201ENST00000536498 666 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC007494.1-201ENST00000562293 760 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC091153.4-201ENST00000570493 480 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL543P-201ENST00000580506 299 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR3136-201ENST00000583498 78 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC067819.1-201ENST00000583846 154 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 HNRNPMP2-201ENST00000596369 599 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AL929325.1-201ENST00000603096 117 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC121758.3-201ENST00000611595 301 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 Metazoa_SRP.171-201ENST00000614579 289 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 NPM2-213ENST00000615914 411 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC245505.3-201ENST00000616788 358 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC005790.1-201ENST00000619774 450 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 NPM2-214ENST00000621538 645 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms