RNA–Protein interactions for RNA: ENST00000367069.6

RSPH3-202, Transcript of radial spoke head 3 homolog, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RSPH3, Length 6,561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3-202ENST00000367069 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
RSPH3-202ENST00000367069 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.62
RSPH3-202ENST00000367069 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
RSPH3-202ENST00000367069 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
RSPH3-202ENST00000367069 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
RSPH3-202ENST00000367069 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
RSPH3-202ENST00000367069 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.34
RSPH3-202ENST00000367069 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
RSPH3-202ENST00000367069 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
RSPH3-202ENST00000367069 APLP2Q06481 763 aa16.81■□□□□ 0.28
RSPH3-202ENST00000367069 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
RSPH3-202ENST00000367069 CCDC180Q9P1Z9 1646 aa16.71■□□□□ 0.26
RSPH3-202ENST00000367069 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
RSPH3-202ENST00000367069 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
RSPH3-202ENST00000367069 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
RSPH3-202ENST00000367069 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
RSPH3-202ENST00000367069 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
RSPH3-202ENST00000367069 MYO15BQ96JP2 1530 aa16.43■□□□□ 0.22
RSPH3-202ENST00000367069 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
RSPH3-202ENST00000367069 DCAF1Q9Y4B6 1507 aa16.38■□□□□ 0.21
RSPH3-202ENST00000367069 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
RSPH3-202ENST00000367069 YTHDC1Q96MU7 727 aaKnown RBP16.37■□□□□ 0.21
RSPH3-202ENST00000367069 CENPBP07199 599 aaPredicted RBP16.29■□□□□ 0.2
RSPH3-202ENST00000367069 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
RSPH3-202ENST00000367069 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
RSPH3-202ENST00000367069 HRCP23327 699 aa16.2■□□□□ 0.18
RSPH3-202ENST00000367069 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
RSPH3-202ENST00000367069 ITGAEP38570 1179 aa16.09■□□□□ 0.17
RSPH3-202ENST00000367069 NACADO15069 1562 aa16.03■□□□□ 0.16
RSPH3-202ENST00000367069 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.15
RSPH3-202ENST00000367069 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
RSPH3-202ENST00000367069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.14
RSPH3-202ENST00000367069 MYT1LQ9UL68 1186 aa15.91■□□□□ 0.14
RSPH3-202ENST00000367069 ABCC9O60706 1549 aa15.87■□□□□ 0.13
RSPH3-202ENST00000367069 NEFLP07196 543 aa15.87■□□□□ 0.13
RSPH3-202ENST00000367069 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
RSPH3-202ENST00000367069 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
RSPH3-202ENST00000367069 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.13
RSPH3-202ENST00000367069 MYT1Q01538 1121 aa15.82■□□□□ 0.12
RSPH3-202ENST00000367069 POLR3GLQ9BT43 218 aa15.81■□□□□ 0.12
RSPH3-202ENST00000367069 DIEXFQ68CQ4 756 aaKnown RBP15.69■□□□□ 0.1
RSPH3-202ENST00000367069 FAM50AQ14320 339 aaKnown RBP15.61■□□□□ 0.09
RSPH3-202ENST00000367069 NEUROD1Q13562 356 aa15.56■□□□□ 0.08
RSPH3-202ENST00000367069 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
RSPH3-202ENST00000367069 BCANQ96GW7 911 aa15.45■□□□□ 0.06
RSPH3-202ENST00000367069 GTF3C3Q9Y5Q9 886 aa15.45■□□□□ 0.06
RSPH3-202ENST00000367069 TRIM52Q96A61 297 aa15.43■□□□□ 0.06
RSPH3-202ENST00000367069 P3H3Q8IVL6 736 aa15.4■□□□□ 0.06
RSPH3-202ENST00000367069 FBLN2P98095 1184 aa15.39■□□□□ 0.05
RSPH3-202ENST00000367069 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
RSPH3-202ENST00000367069 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
RSPH3-202ENST00000367069 ZNF326Q5BKZ1 582 aaKnown RBP15.32■□□□□ 0.04
RSPH3-202ENST00000367069 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
RSPH3-202ENST00000367069 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
RSPH3-202ENST00000367069 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
RSPH3-202ENST00000367069 ANP32CO43423 234 aa15.19■□□□□ 0.02
RSPH3-202ENST00000367069 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
RSPH3-202ENST00000367069 ACIN1Q9UKV3 1341 aaKnown RBP15.18■□□□□ 0.02
RSPH3-202ENST00000367069 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
RSPH3-202ENST00000367069 CLSPNQ9HAW4 1339 aa15.11■□□□□ 0.01
RSPH3-202ENST00000367069 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
RSPH3-202ENST00000367069 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
RSPH3-202ENST00000367069 CDK11AQ9UQ88 783 aaPredicted RBP14.99□□□□□ -0.01
RSPH3-202ENST00000367069 BCL11AQ9H165 835 aa14.98□□□□□ -0.01
RSPH3-202ENST00000367069 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
RSPH3-202ENST00000367069 DDX10Q13206 875 aaKnown RBP14.97□□□□□ -0.01
RSPH3-202ENST00000367069 HIRIP3Q9BW71 556 aaPredicted RBP14.95□□□□□ -0.02
RSPH3-202ENST00000367069 CHIC2Q9UKJ5 165 aa14.94□□□□□ -0.02
RSPH3-202ENST00000367069 FKBP8Q14318 412 aa14.94□□□□□ -0.02
RSPH3-202ENST00000367069 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
RSPH3-202ENST00000367069 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
RSPH3-202ENST00000367069 NCAPD3P42695 1498 aa14.91□□□□□ -0.02
RSPH3-202ENST00000367069 MIER1Q8N108 512 aa14.89□□□□□ -0.03
RSPH3-202ENST00000367069 TONSLQ96HA7 1378 aa14.88□□□□□ -0.03
RSPH3-202ENST00000367069 SLC24A1O60721 1099 aa14.87□□□□□ -0.03
RSPH3-202ENST00000367069 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
RSPH3-202ENST00000367069 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
RSPH3-202ENST00000367069 SALL2Q9Y467 1007 aaPredicted RBP14.85□□□□□ -0.03
RSPH3-202ENST00000367069 HNRNPUQ00839 825 aaKnown RBP eCLIP14.84□□□□□ -0.03
RSPH3-202ENST00000367069 CANXP27824 592 aaKnown RBP14.84□□□□□ -0.03
RSPH3-202ENST00000367069 EEA1Q15075 1411 aa14.83□□□□□ -0.04
RSPH3-202ENST00000367069 CLIP1P30622 1438 aa14.82□□□□□ -0.04
RSPH3-202ENST00000367069 CEP162Q5TB80 1403 aa14.81□□□□□ -0.04
RSPH3-202ENST00000367069 IRX6P78412 446 aaPredicted RBP14.79□□□□□ -0.04
RSPH3-202ENST00000367069 BAZ1BQ9UIG0 1483 aaKnown RBP14.79□□□□□ -0.04
RSPH3-202ENST00000367069 ESF1Q9H501 851 aaKnown RBP14.78□□□□□ -0.04
RSPH3-202ENST00000367069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
RSPH3-202ENST00000367069 SENP3-EIF4A1A0A087X0R7 540 aa14.75□□□□□ -0.05
RSPH3-202ENST00000367069 CHGAP10645 457 aaKnown RBP14.74□□□□□ -0.05
RSPH3-202ENST00000367069 KDM2AQ9Y2K7 1162 aa14.74□□□□□ -0.05
RSPH3-202ENST00000367069 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
RSPH3-202ENST00000367069 GOLGA3Q08378 1498 aa14.71□□□□□ -0.05
RSPH3-202ENST00000367069 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
RSPH3-202ENST00000367069 NPM1P06748 294 aaKnown RBP eCLIP14.7□□□□□ -0.06
RSPH3-202ENST00000367069 SENP3Q9H4L4 574 aaPredicted RBP14.7□□□□□ -0.06
RSPH3-202ENST00000367069 ANP32AP39687 249 aaKnown RBP14.69□□□□□ -0.06
RSPH3-202ENST00000367069 MTUS2Q5JR59 1369 aa14.69□□□□□ -0.06
RSPH3-202ENST00000367069 HMGXB3Q12766 1538 aa14.69□□□□□ -0.06
RSPH3-202ENST00000367069 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
RSPH3-202ENST00000367069 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms