Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL512624.1-201ENST00000613638 469 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 RN7SL722P-201ENST00000617780 284 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 RN7SL565P-201ENST00000618246 284 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC019278.1-201ENST00000623516 479 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 THAP12P4-201ENST00000528321 2266 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC009313.2-201ENST00000417893 1941 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 RNU4-39P-201ENST00000362455 127 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 RNU4-4P-201ENST00000364588 130 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 RNU1-106P-201ENST00000384382 164 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 RNU6-225P-201ENST00000384613 103 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 RNU1-82P-201ENST00000390851 165 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 Z98745.1-201ENST00000402553 494 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 SNORA3C-201ENST00000408792 125 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 RN7SKP273-201ENST00000411392 314 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 DPY19L1P2-201ENST00000426647 915 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 USP12PY-201ENST00000427677 1064 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AL356535.1-201ENST00000440335 398 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 MTCYBP12-201ENST00000440559 1134 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 YWHAQP9-201ENST00000445891 512 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC073850.1-201ENST00000449243 255 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 SLC25A18P1-201ENST00000449385 454 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 MYO5BP2-201ENST00000449815 1277 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AL513343.1-201ENST00000451818 792 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC069499.1-201ENST00000489433 509 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 SUMO1P1-201ENST00000497904 306 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 MTCO1P31-201ENST00000506355 492 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 RNA5SP497-201ENST00000516081 97 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 VTA1P2-201ENST00000520205 911 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC133555.2-201ENST00000550213 292 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC141257.3-201ENST00000572906 215 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 SS18L2P2-201ENST00000583960 235 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 BPIFA4P-203ENST00000603168 689 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 MTCO3P22-201ENST00000603219 784 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC011453.2-201ENST00000603737 729 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC004948.1-201ENST00000609858 672 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC067852.7-201ENST00000623270 535 ntBASIC3.32□□□□□ -1.88
HLA-DQA1P01909 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA1P01909 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 BDP1P-201ENST00000582658 1990 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 BX005019.1-201ENST00000561881 1810 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC017002.4-201ENST00000604721 1525 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 U8.4-201ENST00000363626 134 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC093719.1-202ENST00000392735 373 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AL591848.1-201ENST00000413092 322 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA1P01909 GTF2IP5-201ENST00000414608 731 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 AC099336.2-201ENST00000422457 254 ntBASIC3.31□□□□□ -1.88
HLA-DQA1P01909 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms