Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX2-2O95096 AL158211.1-201ENST00000566763 763 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 BPTFP1-201ENST00000579209 492 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX2-2O95096 AC110743.1-201ENST00000584870 478 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AL583856.2-201ENST00000606298 543 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AP004247.3-201ENST00000608682 624 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AP000238.1-201ENST00000608759 426 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AL122125.1-201ENST00000616999 600 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AC015914.2-201ENST00000618167 288 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AC015804.1-201ENST00000622935 435 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 AP003072.4-201ENST00000624580 310 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-2O95096 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX2-2O95096 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NKX2-2O95096 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 AC093849.1-201ENST00000563631 2209 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NKX2-2O95096 SMG1P6-201ENST00000532337 2930 ntBASIC4.58□□□□□ -1.68
NKX2-2O95096 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX2-2O95096 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-2O95096 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AL079342.2-201ENST00000403367 482 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 RNU4-34P-201ENST00000410431 124 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 RNU6-575P-201ENST00000411326 105 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 RPS3AP25-201ENST00000411660 793 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 OR51A3P-201ENST00000413596 924 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AL592310.1-201ENST00000414330 671 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AC092647.3-201ENST00000443044 633 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AC012512.1-201ENST00000446594 718 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC092155.2-201ENST00000454675 477 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 SNORD11.1-201ENST00000459482 85 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 RN7SL319P-201ENST00000480656 221 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC069528.1-202ENST00000482888 637 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AC020699.1-201ENST00000505161 445 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 Y_RNA.719-201ENST00000517156 106 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC027308.1-201ENST00000517993 110 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AL442163.2-201ENST00000553912 710 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-2O95096 BNIP3P32-201ENST00000600015 554 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AL035411.2-201ENST00000604022 421 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC063944.3-201ENST00000609969 533 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC009237.15-201ENST00000610252 501 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 AC037198.3-201ENST00000616754 526 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC019206.1-201ENST00000621938 425 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC015908.5-201ENST00000623289 343 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AP002799.1-201ENST00000623552 423 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AL353662.3-201ENST00000625131 237 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AP001002.2-201ENST00000625137 386 ntBASIC4.57□□□□□ -1.68
NKX2-2O95096 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX2-2O95096 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-2O95096 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-2O95096 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NKX2-2O95096 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX2-2O95096 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX2-2O95096 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
NKX2-2O95096 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 RARSP1-201ENST00000542842 1418 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-2O95096 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NKX2-2O95096 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NKX2-2O95096 RNU6-619P-201ENST00000365146 108 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms