Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLDN4O14493 RNU6-354P-201ENST00000383862 107 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 RNU6-610P-201ENST00000384264 107 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AP002784.2-201ENST00000397300 549 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AL035405.1-201ENST00000400795 710 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 MIR1303-201ENST00000408625 86 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 AC245028.1-201ENST00000423259 256 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AC012519.1-201ENST00000424588 610 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 NPM1P24-201ENST00000428039 894 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 RPS17P8-201ENST00000434525 335 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 MTND2P8-201ENST00000450555 1025 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AL035407.2-201ENST00000454090 378 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AURKAPS2-201ENST00000454983 333 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 RPS5P7-201ENST00000456664 608 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN4O14493 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN4O14493 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN4O14493 RN7SL558P-201ENST00000497468 299 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CLDN4O14493 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN4O14493 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN4O14493 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 RNA5SP249-201ENST00000516127 99 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 RNU6-709P-201ENST00000517257 104 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.56□□□□□ -1.68
CLDN4O14493 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 DYNLL1P4-201ENST00000549314 266 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AL049839.1-201ENST00000556151 657 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 AC018552.3-201ENST00000567416 561 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN4O14493 MIR4330-201ENST00000579077 105 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 MIR3667-201ENST00000581025 74 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN4O14493 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN4O14493 BNIP3P31-201ENST00000604515 566 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 OR2L1P-202ENST00000641567 1023 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AL596275.2-204ENST00000641628 552 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 AL596275.2-206ENST00000641957 626 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN4O14493 AC026951.1-201ENST00000559530 2459 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN4O14493 AL731532.2-201ENST00000623542 1953 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN4O14493 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN4O14493 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN4O14493 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN4O14493 AC010300.1-201ENST00000600671 5134 ntBASIC4.56□□□□□ -1.68
CLDN4O14493 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN4O14493 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN4O14493 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN4O14493 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN4O14493 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN4O14493 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN4O14493 RNU6-178P-201ENST00000384631 104 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 RPL22P22-201ENST00000395439 379 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN4O14493 RPS24P12-201ENST00000402084 394 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 AL512430.2-201ENST00000406786 339 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN4O14493 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
CLDN4O14493 FO393414.1-201ENST00000428697 1184 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CLDN4O14493 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN4O14493 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN4O14493 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN4O14493 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN4O14493 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN4O14493 AC022795.1-201ENST00000473808 480 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN4O14493 TPT1P3-201ENST00000492841 512 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN4O14493 AC113430.1-201ENST00000506872 718 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 ENPP7P9-201ENST00000514456 627 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 RNU1-6P-201ENST00000516290 144 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN4O14493 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN4O14493 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN4O14493 AP003102.1-201ENST00000525638 661 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN4O14493 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN4O14493 AC133555.2-201ENST00000550213 292 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLDN4O14493 AC087283.1-201ENST00000604029 1074 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 AL031320.1-201ENST00000604177 357 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 AL353600.1-201ENST00000608148 251 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 FAM27B-201ENST00000610601 213 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN4O14493 FRG1HP-204ENST00000617940 757 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 AC138907.10-201ENST00000623708 983 ntBASIC4.55□□□□□ -1.68
CLDN4O14493 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN4O14493 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CLDN4O14493 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN4O14493 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms