Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC017037.1-201ENST00000508460 471 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 IGLC4-201ENST00000517690 248 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AC107934.1-201ENST00000522215 217 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AC018630.1-201ENST00000541376 925 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AC068831.4-201ENST00000556118 109 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 NPM1P42-201ENST00000560329 862 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 POLR3GP2-201ENST00000588366 668 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 VN1R107P-201ENST00000601784 209 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 XIAPP1-201ENST00000603162 600 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AL627309.6-201ENST00000606857 840 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AC015819.1-201ENST00000613588 663 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 OR2L1P-202ENST00000641567 1023 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AL133243.4-201ENST00000623116 3109 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 TCP11X1-202ENST00000622971 1372 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB11Q9Y5F2 AC092125.1-201ENST00000562568 1995 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC007823.1-201ENST00000569932 1566 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC092821.3-202ENST00000641304 2767 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 RNU6-853P-201ENST00000364306 107 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 RNU6-996P-201ENST00000365438 107 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 Y_RNA.395-201ENST00000383945 109 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 Y_RNA.401-201ENST00000383965 117 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 RNU6-831P-201ENST00000384548 107 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AL359715.1-201ENST00000404330 555 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 CHEK2P3-201ENST00000416118 248 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 HSPE1P1-201ENST00000421494 318 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AL731534.1-201ENST00000434711 269 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AL031681.1-201ENST00000443304 400 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AL645937.3-201ENST00000453647 936 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 RPS14P8-201ENST00000478778 369 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 RPS4XP23-201ENST00000487801 237 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AL117692.1-201ENST00000494283 713 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC105417.1-201ENST00000514691 285 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 OR52K3P-201ENST00000531655 943 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 MIR4428-201ENST00000584884 73 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AP001330.4-201ENST00000604350 154 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC211486.4-201ENST00000621495 113 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC022819.1-201ENST00000563495 3910 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 AC022031.1-201ENST00000585985 2593 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 KPNA2P2-201ENST00000419546 1489 ntBASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHB11Q9Y5F2 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
PCDHB11Q9Y5F2 AC092447.10-201ENST00000620607 1652 ntBASIC6.77□□□□□ -1.32
PCDHB11Q9Y5F2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.77□□□□□ -1.32
PCDHB11Q9Y5F2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms