Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
RAB40AQ8WXH6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 MTND4P8-201ENST00000514997 1362 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 RNU6-839P-201ENST00000363347 108 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 RNU4-2-201ENST00000365668 141 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 GTF2IP5-201ENST00000414608 731 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 MTND2P16-201ENST00000419987 799 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 GTF2IP23-201ENST00000423746 351 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC010099.3-201ENST00000423896 409 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 MTCO1P54-201ENST00000430139 712 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 RPL12P17-201ENST00000432393 498 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AL353597.2-202ENST00000434901 373 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC006335.2-201ENST00000437993 330 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 RPS27AP15-201ENST00000447672 466 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 MTCO2P6-201ENST00000463134 685 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 PPIAP21-201ENST00000464473 501 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC109464.1-201ENST00000511091 819 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC109471.1-201ENST00000511631 612 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 BX510359.5-201ENST00000515651 304 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 DUXAP5-201ENST00000529668 529 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 OR8G3P-201ENST00000533406 921 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 MRPS21P7-201ENST00000566937 238 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 MIR3176-201ENST00000582210 90 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 RN7SL435P-201ENST00000584418 282 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 NF1P5-201ENST00000588287 448 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC069545.1-201ENST00000605671 358 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC079395.2-201ENST00000610982 737 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC025574.2-201ENST00000615621 514 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC231759.1-201ENST00000616455 597 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 MIR6826-201ENST00000617808 98 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC022509.4-201ENST00000621404 572 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC136428.4-201ENST00000634254 1155 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 AC073869.10-201ENST00000642016 354 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 LINC01963-201ENST00000562038 3148 ntBASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAB40AQ8WXH6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RAB40AQ8WXH6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
RAB40AQ8WXH6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RAB40AQ8WXH6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RAB40AQ8WXH6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
RAB40AQ8WXH6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.65□□□□□ -1.66
RAB40AQ8WXH6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RAB40AQ8WXH6 Z99496.1-201ENST00000469424 1477 ntBASIC4.65□□□□□ -1.66
RAB40AQ8WXH6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 RNA5SP319-201ENST00000362768 119 ntBASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 AL391361.1-201ENST00000405580 489 ntBASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 AL450992.3-201ENST00000413192 568 ntBASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 AC007394.1-201ENST00000421941 531 ntBASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 AL031736.2-201ENST00000426573 787 ntBASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.65□□□□□ -1.67
RAB40AQ8WXH6 HIGD1AP4-201ENST00000430194 280 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms