Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO4Q2I0M5 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO4Q2I0M5 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO4Q2I0M5 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO4Q2I0M5 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO4Q2I0M5 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RSPO4Q2I0M5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.26□□□□□ -1.41
RSPO4Q2I0M5 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.26□□□□□ -1.41
RSPO4Q2I0M5 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 HCG18-244ENST00000602516 2890 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 Y_RNA.557-201ENST00000384680 107 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 MIR1203-201ENST00000408812 85 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 RPS12P24-201ENST00000412619 387 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 SNRPFP1-201ENST00000414761 252 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC130360.1-201ENST00000425489 1117 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 DSTNP5-201ENST00000427921 523 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 RPL36AP53-201ENST00000432891 316 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC132479.1-201ENST00000449160 144 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC135999.1-201ENST00000478962 479 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC068781.1-201ENST00000488231 618 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC104564.1-201ENST00000493028 407 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 VN1R104P-201ENST00000505115 1009 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC025674.1-201ENST00000507074 324 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 KHDC1P1-201ENST00000511053 508 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 SMURF2P1-201ENST00000514992 481 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 RNU6-559P-201ENST00000516151 98 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC104986.1-201ENST00000517978 436 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 BTF3P12-201ENST00000519620 469 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC130365.2-201ENST00000525882 1201 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 NIFKP8-201ENST00000560500 874 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC034105.3-201ENST00000565294 442 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ZNF322P1-201ENST00000568013 1209 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 MIR4680-201ENST00000580906 66 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 MIR3682-201ENST00000581338 84 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 DISC2.1-201ENST00000612827 205 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC093913.1-201ENST00000614178 329 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AL592429.1-201ENST00000403909 1473 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC008627.1-201ENST00000517511 1704 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 VN2R3P-201ENST00000422626 1412 ntBASIC6.25□□□□□ -1.41
RSPO4Q2I0M5 AC110597.1-201ENST00000562669 3176 ntBASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 AP002833.3-201ENST00000625075 2265 ntBASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 AC092447.10-201ENST00000620607 1652 ntBASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 AC009237.3-203ENST00000442128 3551 ntBASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RSPO4Q2I0M5 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms