Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 U3.4-201ENST00000363352 213 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 RNA5SP30-201ENST00000365552 115 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 HMGB1P10-201ENST00000395823 563 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 Z75741.2-201ENST00000417272 1167 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 NENFP1-201ENST00000419476 466 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 RPL34P3-201ENST00000421454 338 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 HSPD1P12-201ENST00000429127 1069 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 MTCYBP34-201ENST00000439552 670 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC092641.1-201ENST00000440229 772 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AL591503.2-201ENST00000442314 1005 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 GTF3AP5-201ENST00000442645 697 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 CDC27P1-201ENST00000445384 715 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 RNU6-956P-201ENST00000458868 103 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC026348.1-201ENST00000462549 1053 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 RN7SL717P-201ENST00000478343 297 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 RN7SL570P-201ENST00000484405 292 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 NENFP3-201ENST00000503735 313 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC004069.2-201ENST00000505438 1114 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC109464.2-201ENST00000510242 943 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC016559.2-201ENST00000510759 359 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AP000873.5-201ENST00000533906 236 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 HIGD1AP17-201ENST00000554576 276 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC040958.1-201ENST00000561102 201 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AADACP1-206ENST00000561502 1193 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 MIR4311-201ENST00000580794 100 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 SLC25A36P1-201ENST00000590111 465 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC006539.2-201ENST00000601729 572 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 WISP1-OT1-201ENST00000602893 642 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC021749.1-201ENST00000604322 607 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC090186.1-201ENST00000605991 572 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC008498.1-201ENST00000613012 531 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 FRG1HP-204ENST00000617940 757 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 Z83820.1-201ENST00000456978 1499 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 ICE2P1-201ENST00000512800 1849 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 AC087359.1-201ENST00000508335 1740 ntBASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 NXF4-202ENST00000416098 1465 ntBASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PACSIN3Q9UKS6 SNORA51.1-201ENST00000363243 140 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms