Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC012005.1-201ENST00000624575 75 ntBASIC3.97□□□□□ -1.77
CHD8Q9HCK8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CHD8Q9HCK8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHD8Q9HCK8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHD8Q9HCK8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CHD8Q9HCK8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.96□□□□□ -1.77
CHD8Q9HCK8 AC093297.3-201ENST00000607056 2517 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC083899.2-201ENST00000423285 1376 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC092681.1-201ENST00000297369 291 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 SCARNA14-201ENST00000516903 136 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 DEFB109D-201ENST00000529497 240 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AP001357.1-201ENST00000586304 1053 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 ADAD1P2-201ENST00000588476 646 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AL033523.1-201ENST00000605153 153 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AL672167.1-203ENST00000641299 2975 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 Y_RNA.40-201ENST00000362645 93 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 RNU4-6P-201ENST00000410804 122 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 RPS7P15-201ENST00000415804 584 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AL935212.3-201ENST00000450729 284 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AP002884.2-201ENST00000471647 395 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 CYCSP30-201ENST00000546447 172 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC243654.2-201ENST00000612843 443 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.96□□□□□ -1.78
CHD8Q9HCK8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.96□□□□□ -1.78
CHD8Q9HCK8 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 AC008171.1-201ENST00000395058 200 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 MIR1261-201ENST00000408659 82 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 RNU2-65P-201ENST00000410162 185 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 MIR6133-201ENST00000617057 108 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 AP001153.1-201ENST00000641024 338 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 AL672167.1-205ENST00000641112 3080 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 HLA-N-201ENST00000437516 135 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 RPS4XP10-201ENST00000465034 731 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 VN1R78P-201ENST00000597393 564 ntBASIC3.95□□□□□ -1.78
CHD8Q9HCK8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CHD8Q9HCK8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 UBE2CP3-201ENST00000502715 450 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms