Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 SNX18P12-201ENST00000624821 759 ntBASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 CR381572.1-201ENST00000625098 102 ntBASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 AC140479.4-205ENST00000636339 820 ntBASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 AC102941.1-201ENST00000567616 1537 ntBASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 AC005614.1-201ENST00000598952 3653 ntBASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA2Q6UWI4 AP003175.1-201ENST00000641383 6658 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 SAMMSON-203ENST00000641005 2168 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AL139276.1-201ENST00000311910 1001 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 RNY1P14-201ENST00000384426 108 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 RNU6-33P-201ENST00000384793 107 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 MIR320B1-201ENST00000390209 79 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 SOD2P1-201ENST00000396543 562 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 RN7SKP268-201ENST00000411107 316 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 VDAC1P9-201ENST00000412766 841 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 DPH3P2-201ENST00000422618 250 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 CHIAP3-201ENST00000423668 1133 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 SKA2P1-201ENST00000425592 390 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 HMGB3P11-201ENST00000440127 604 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AL161626.1-201ENST00000441480 490 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AL031681.1-201ENST00000443304 400 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC007383.1-201ENST00000445875 636 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC073909.1-201ENST00000447112 999 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AL031736.1-201ENST00000449688 618 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 RN7SL393P-201ENST00000463588 296 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC092324.1-201ENST00000468671 324 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AP003385.3-201ENST00000472498 287 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC104563.1-201ENST00000476147 376 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC114324.2-202ENST00000503812 134 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 RNU6-408P-201ENST00000515910 100 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 RNA5SP454-201ENST00000517231 127 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC022882.1-201ENST00000532142 501 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC092718.4-201ENST00000566639 716 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AL356432.3-201ENST00000568952 465 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC011447.2-201ENST00000592921 283 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC122710.3-201ENST00000606566 541 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC098479.1-201ENST00000609225 154 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC015712.7-201ENST00000615211 635 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC211486.4-201ENST00000621495 113 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 PLCE1P1-201ENST00000622094 305 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 OR52H1-202ENST00000641796 1061 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 NF1P8-201ENST00000415351 1461 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 SF3A3P1-201ENST00000446317 1477 ntBASIC5.77□□□□□ -1.49
SHISA2Q6UWI4 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms