Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP1P23763 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VAMP1P23763 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VAMP1P23763 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP1P23763 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.81□□□□□ -1.48
VAMP1P23763 AC105074.1-201ENST00000623380 3095 ntBASIC5.81□□□□□ -1.48
VAMP1P23763 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP1P23763 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP1P23763 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP1P23763 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.81□□□□□ -1.48
VAMP1P23763 AC010401.2-201ENST00000575137 4934 ntBASIC5.81□□□□□ -1.48
VAMP1P23763 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VAMP1P23763 DNM1P47-203ENST00000571780 12667 ntBASIC5.81□□□□□ -1.48
VAMP1P23763 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP1P23763 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP1P23763 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
VAMP1P23763 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VAMP1P23763 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 RNU6-181P-201ENST00000363225 107 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 RNU6-1085P-201ENST00000363576 107 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 RN7SKP107-201ENST00000364157 290 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VAMP1P23763 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 RPS4XP5-201ENST00000419038 768 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 RPSAP1-201ENST00000421328 880 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 RPL7P57-201ENST00000423238 740 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 EZH2P1-201ENST00000431167 291 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC093156.1-201ENST00000440382 670 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 TVP23CP1-201ENST00000450317 639 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 PYM1-204ENST00000454792 884 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 SNORD121B-201ENST00000458838 81 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VAMP1P23763 RPL35P6-201ENST00000490024 372 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC114967.1-201ENST00000504890 259 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 RNU6-445P-201ENST00000516949 107 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.8□□□□□ -1.48
VAMP1P23763 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.8□□□□□ -1.48
VAMP1P23763 AL135978.1-201ENST00000553618 1266 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 RPS3AP4-201ENST00000555161 764 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC009117.1-201ENST00000563948 554 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 UBE2L4-201ENST00000587688 464 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC018737.1-201ENST00000603900 204 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC091193.1-201ENST00000604640 448 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 OR6R2P-201ENST00000609216 300 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AC243830.2-201ENST00000618067 630 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 AL158801.5-201ENST00000623123 465 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 SNX18P10-201ENST00000625014 519 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 MFSD8-256ENST00000641949 1640 ntBASIC5.8□□□□□ -1.48
VAMP1P23763 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAMP1P23763 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.8□□□□□ -1.48
VAMP1P23763 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
VAMP1P23763 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP1P23763 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAMP1P23763 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
VAMP1P23763 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.79□□□□□ -1.48
VAMP1P23763 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms