Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 AC017079.2-201ENST00000416102 485 ntBASIC2.5□□□□□ -2.01
APOBP04114 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.5□□□□□ -2.01
APOBP04114 AGGF1P3-201ENST00000493675 1213 ntBASIC2.5□□□□□ -2.01
APOBP04114 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.5□□□□□ -2.01
APOBP04114 RNA5SP179-201ENST00000517284 121 ntBASIC2.5□□□□□ -2.01
APOBP04114 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 DPPA3P2-201ENST00000553589 478 ntBASIC2.5□□□□□ -2.01
APOBP04114 CYCSP40-201ENST00000575927 294 ntBASIC2.5□□□□□ -2.01
APOBP04114 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.5□□□□□ -2.01
APOBP04114 AC138932.5-201ENST00000617759 563 ntBASIC2.5□□□□□ -2.01
APOBP04114 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC2.5□□□□□ -2.01
APOBP04114 MARK2P15-201ENST00000432204 2186 ntBASIC2.5□□□□□ -2.01
APOBP04114 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 AP000473.2-201ENST00000602659 1537 ntBASIC2.5□□□□□ -2.01
APOBP04114 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC2.5□□□□□ -2.01
APOBP04114 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.5□□□□□ -2.01
APOBP04114 RN7SKP57-201ENST00000517248 293 ntBASIC2.5□□□□□ -2.01
APOBP04114 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC2.5□□□□□ -2.01
APOBP04114 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC2.5□□□□□ -2.01
APOBP04114 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
APOBP04114 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBP04114 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBP04114 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBP04114 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.49□□□□□ -2.01
APOBP04114 MIR3922-201ENST00000585192 84 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 AC012493.2-201ENST00000595083 291 ntBASIC2.49□□□□□ -2.01
APOBP04114 AL033523.1-201ENST00000605153 153 ntBASIC2.49□□□□□ -2.01
APOBP04114 MIR7112-201ENST00000616126 65 ntBASIC2.49□□□□□ -2.01
APOBP04114 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
APOBP04114 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 AC097461.1-201ENST00000568928 2821 ntBASIC2.49□□□□□ -2.01
APOBP04114 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 DNM1P47-203ENST00000571780 12667 ntBASIC2.49□□□□□ -2.01
APOBP04114 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 RNU2-65P-201ENST00000410162 185 ntBASIC2.49□□□□□ -2.01
APOBP04114 AL158156.1-201ENST00000422509 473 ntBASIC2.49□□□□□ -2.01
APOBP04114 FCF1P7-201ENST00000451185 558 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBP04114 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 AC037471.2-201ENST00000564941 598 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC005520.3-201ENST00000602874 370 ntBASIC2.49□□□□□ -2.01
APOBP04114 MTCO3P22-201ENST00000603219 784 ntBASIC2.49□□□□□ -2.01
APOBP04114 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 SNORD66.1-201ENST00000391230 76 ntBASIC2.49□□□□□ -2.01
APOBP04114 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 MIR1251-201ENST00000408552 70 ntBASIC2.49□□□□□ -2.01
APOBP04114 MTND2P15-201ENST00000418575 892 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC062016.2-201ENST00000420950 676 ntBASIC2.49□□□□□ -2.01
APOBP04114 DNAJA1P1-201ENST00000425106 1187 ntBASIC2.49□□□□□ -2.01
APOBP04114 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 GTF3AP5-201ENST00000442645 697 ntBASIC2.49□□□□□ -2.01
APOBP04114 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBP04114 AC073387.1-201ENST00000453261 709 ntBASIC2.49□□□□□ -2.01
APOBP04114 RNA5SP116-201ENST00000516132 98 ntBASIC2.49□□□□□ -2.01
APOBP04114 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC2.49□□□□□ -2.01
APOBP04114 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBP04114 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 CR392039.4-201ENST00000624968 501 ntBASIC2.49□□□□□ -2.01
APOBP04114 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms