Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 GLI1-208ENST00000546141 3475 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 UBAP2L-201ENST00000271877 3997 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FP700111.1-201ENST00000441760 2502 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RACGAP1P-201ENST00000550663 1879 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FYN-229ENST00000538466 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL672167.1-204ENST00000641875 3017 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MAPK10-210ENST00000449047 2382 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AMIGO2-203ENST00000550413 2856 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 DSG1-201ENST00000257192 5045 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SFTPA1-201ENST00000398636 2212 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01346-201ENST00000412674 3242 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 EML1-202ENST00000327921 3715 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MCPH1-203ENST00000519480 2917 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CAB39L-205ENST00000409308 2416 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FCAR-209ENST00000469767 1432 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CHCHD5-202ENST00000409719 3272 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ERCC3-201ENST00000285398 2750 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF181-201ENST00000392232 2791 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CD22-203ENST00000419549 2642 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CCL27-201ENST00000259631 446 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CA8-201ENST00000317995 3812 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL161781.1-201ENST00000354277 403 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR367-201ENST00000362299 68 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 PARP1-201ENST00000366790 570 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-45P-201ENST00000384471 107 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.532-201ENST00000384590 113 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR624-201ENST00000385217 97 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IGLV3-27-201ENST00000390304 377 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 U8.15-201ENST00000390947 134 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SPACA3-203ENST00000394638 508 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MRPL52-204ENST00000397505 333 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 OTX2-202ENST00000408990 1082 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TTLL11-IT1-201ENST00000411790 1052 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM236D-201ENST00000419795 433 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RAB15-202ENST00000426039 683 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL133553.1-201ENST00000428391 353 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RPS27AP12-201ENST00000429552 465 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC016027.3-201ENST00000429618 361 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC084851.3-201ENST00000432771 573 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM231A-201ENST00000434336 510 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CFL1P8-201ENST00000436148 475 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TUBB4BP6-201ENST00000437576 479 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL7AP61-201ENST00000443410 636 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC096638.1-201ENST00000444678 216 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL606468.1-201ENST00000444750 510 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC016696.1-201ENST00000446949 318 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms