Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PHOX2BQ99453 WBP11P1-201ENST00000562560 1931 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
PHOX2BQ99453 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PHOX2BQ99453 RN7SKP36-201ENST00000363997 312 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 RNA5SP433-201ENST00000364491 114 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 RNA5SP279-201ENST00000365513 117 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 Y_RNA.482-201ENST00000384377 111 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 Y_RNA.556-201ENST00000384677 113 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC016769.3-201ENST00000396562 315 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 U3.31-201ENST00000408113 216 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 RN7SKP247-201ENST00000411094 308 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 AL138799.3-201ENST00000438968 350 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC097359.1-201ENST00000447946 463 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 SETP20-201ENST00000457046 852 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 RPL30P15-201ENST00000457129 321 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC079168.1-201ENST00000458741 345 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 snoU13.8-201ENST00000458890 104 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC084121.1-201ENST00000533882 835 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 CYCSP28-201ENST00000534284 321 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 MTCO3P23-201ENST00000561363 289 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 MIR4302-201ENST00000638058 60 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PHOX2BQ99453 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
PHOX2BQ99453 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
PHOX2BQ99453 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PHOX2BQ99453 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.4□□□□□ -1.22
PHOX2BQ99453 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PHOX2BQ99453 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PHOX2BQ99453 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.4□□□□□ -1.23
PHOX2BQ99453 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.4□□□□□ -1.23
PHOX2BQ99453 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
PHOX2BQ99453 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.4□□□□□ -1.23
PHOX2BQ99453 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
PHOX2BQ99453 AC105046.1-201ENST00000566457 4997 ntBASIC7.4□□□□□ -1.23
PHOX2BQ99453 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PHOX2BQ99453 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 RNU5E-8P-201ENST00000363502 116 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 SNORA10B-201ENST00000384458 133 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 RN7SKP206-201ENST00000410823 293 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 TIMM9P1-201ENST00000436122 256 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC079781.1-201ENST00000441505 394 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 NANOGP10-201ENST00000453325 895 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 RNU7-66P-201ENST00000459469 62 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 RN7SL706P-201ENST00000460079 292 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 UBFD1P1-201ENST00000473259 814 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AL049874.2-201ENST00000492636 288 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC026782.1-201ENST00000512952 449 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AP005435.4-201ENST00000529514 284 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AP000857.1-201ENST00000532151 543 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC026826.3-201ENST00000561747 158 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC010653.1-201ENST00000571108 881 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AP005119.1-201ENST00000580956 292 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms