Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
PRKNO60260 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.46□□□□□ -1.7
PRKNO60260 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRKNO60260 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PRKNO60260 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.46□□□□□ -1.7
PRKNO60260 AC104623.2-202ENST00000623477 4002 ntBASIC4.45□□□□□ -1.7
PRKNO60260 TLK1P1-201ENST00000456760 2440 ntBASIC4.45□□□□□ -1.7
PRKNO60260 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PRKNO60260 OR9K1P-202ENST00000641111 3217 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PRKNO60260 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PRKNO60260 RNU6-1320P-201ENST00000390838 107 ntBASIC4.45□□□□□ -1.7
PRKNO60260 RNU6-244P-201ENST00000391028 104 ntBASIC4.45□□□□□ -1.7
PRKNO60260 RNU6-1269P-201ENST00000391139 107 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AF228730.1-201ENST00000397972 663 ntBASIC4.45□□□□□ -1.7
PRKNO60260 OR51B3P-201ENST00000412287 913 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AC114755.2-201ENST00000413520 361 ntBASIC4.45□□□□□ -1.7
PRKNO60260 SSR1P2-201ENST00000415208 787 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.45□□□□□ -1.7
PRKNO60260 AC019050.1-201ENST00000418508 492 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.45□□□□□ -1.7
PRKNO60260 AC092162.1-201ENST00000432828 434 ntBASIC4.45□□□□□ -1.7
PRKNO60260 RPS17P8-201ENST00000434525 335 ntBASIC4.45□□□□□ -1.7
PRKNO60260 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.45□□□□□ -1.7
PRKNO60260 ELOCP11-201ENST00000436690 332 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AC005154.2-201ENST00000438110 379 ntBASIC4.45□□□□□ -1.7
PRKNO60260 ELOCP16-201ENST00000444494 332 ntBASIC4.45□□□□□ -1.7
PRKNO60260 MTND1P33-201ENST00000446251 917 ntBASIC4.45□□□□□ -1.7
PRKNO60260 RNU6-599P-201ENST00000459383 107 ntBASIC4.45□□□□□ -1.7
PRKNO60260 RNU6-1193P-201ENST00000459461 107 ntBASIC4.45□□□□□ -1.7
PRKNO60260 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.45□□□□□ -1.7
PRKNO60260 AC008897.1-201ENST00000494006 347 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AC021146.5-201ENST00000503544 545 ntBASIC4.45□□□□□ -1.7
PRKNO60260 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 AC108120.2-201ENST00000512973 294 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.45□□□□□ -1.7
PRKNO60260 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.45□□□□□ -1.7
PRKNO60260 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.45□□□□□ -1.7
PRKNO60260 EEF1A1P37-201ENST00000522748 715 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.45□□□□□ -1.7
PRKNO60260 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.45□□□□□ -1.7
PRKNO60260 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.45□□□□□ -1.7
PRKNO60260 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.45□□□□□ -1.7
PRKNO60260 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.45□□□□□ -1.7
PRKNO60260 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.45□□□□□ -1.7
PRKNO60260 MIR4789-201ENST00000577469 82 ntBASIC4.45□□□□□ -1.7
PRKNO60260 MIR4270-201ENST00000581799 70 ntBASIC4.45□□□□□ -1.7
PRKNO60260 Z82195.1-201ENST00000604558 398 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AC009159.2-201ENST00000617603 606 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AP004607.9-201ENST00000618202 316 ntBASIC4.45□□□□□ -1.7
PRKNO60260 MIR6853-201ENST00000619642 74 ntBASIC4.45□□□□□ -1.7
PRKNO60260 RNU6-368P-201ENST00000620928 107 ntBASIC4.45□□□□□ -1.7
PRKNO60260 RNU6-538P-201ENST00000622329 107 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AC015804.1-201ENST00000622935 435 ntBASIC4.45□□□□□ -1.7
PRKNO60260 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.45□□□□□ -1.7
PRKNO60260 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.45□□□□□ -1.7
PRKNO60260 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PRKNO60260 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PRKNO60260 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.45□□□□□ -1.7
PRKNO60260 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 SEPT7P7-201ENST00000420492 1301 ntBASIC4.45□□□□□ -1.7
PRKNO60260 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRKNO60260 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.44□□□□□ -1.7
PRKNO60260 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PRKNO60260 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.44□□□□□ -1.7
PRKNO60260 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 RNU5B-1-201ENST00000363286 116 ntBASIC4.44□□□□□ -1.7
PRKNO60260 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 MIR142-201ENST00000384835 87 ntBASIC4.44□□□□□ -1.7
PRKNO60260 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 RPL37P18-201ENST00000411602 243 ntBASIC4.44□□□□□ -1.7
PRKNO60260 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.44□□□□□ -1.7
PRKNO60260 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.44□□□□□ -1.7
PRKNO60260 LINC00993-201ENST00000420453 540 ntBASIC4.44□□□□□ -1.7
PRKNO60260 E2F6P2-201ENST00000420708 748 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC023128.2-201ENST00000420880 1223 ntBASIC4.44□□□□□ -1.7
PRKNO60260 FABP7P1-201ENST00000424004 391 ntBASIC4.44□□□□□ -1.7
PRKNO60260 NANOGP5-201ENST00000424456 877 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC000041.1-201ENST00000439655 175 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms