Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 SLC25A24-204ENST00000569674 2357 ntBASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 MIR6786-201ENST00000616843 113 ntBASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
TNFRSF11AQ9Y6Q6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC091390.4-202ENST00000476426 537 ntBASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC130371.2-201ENST00000619443 611 ntBASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AL031985.4-201ENST00000642138 673 ntBASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.82■■□□□ 1.4
TNFRSF11AQ9Y6Q6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 CYP2D8P-201ENST00000433633 1490 ntBASIC23.81■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC087499.1-201ENST00000418141 1075 ntBASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 ZNF815P-204ENST00000434898 1737 ntBASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AL160286.2-201ENST00000567150 934 ntBASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TNFRSF11AQ9Y6Q6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TNFRSF11AQ9Y6Q6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TNFRSF11AQ9Y6Q6 AC026271.3-201ENST00000571884 352 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms