Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 TMEM179-206ENST00000616017 1645 ntBASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCA3PQ9Y6N3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CLCA3PQ9Y6N3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCA3PQ9Y6N3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCA3PQ9Y6N3 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.33■□□□□ 0.53
CLCA3PQ9Y6N3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCA3PQ9Y6N3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCA3PQ9Y6N3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 TUBB8P6-201ENST00000436895 1288 ntBASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms