Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.02■□□□□ 0.63
CSNK1G3Q9Y6M4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 AC008040.2-201ENST00000461049 708 ntBASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 AC116562.4-202ENST00000641738 218 ntBASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.01■□□□□ 0.63
CSNK1G3Q9Y6M4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 SLC25A1P2-201ENST00000430693 912 ntBASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 MFAP1P1-201ENST00000442257 1255 ntBASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 CCR12P-201ENST00000446203 998 ntBASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSNK1G3Q9Y6M4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 HMGA1P5-201ENST00000412453 271 ntBASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 AC091390.4-202ENST00000476426 537 ntBASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 Z85996.1-201ENST00000494644 937 ntBASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 FAM87A-204ENST00000613235 858 ntBASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G3Q9Y6M4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms