Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 RARRES2P7-201ENST00000567349 469 ntBASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 AL118508.1-201ENST00000613502 2345 ntBASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SPCS1Q9Y6A9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SPCS1Q9Y6A9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SPCS1Q9Y6A9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SPCS1Q9Y6A9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SPCS1Q9Y6A9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 AC079089.2-201ENST00000531211 1277 ntBASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 CHML-204ENST00000638121 920 ntTSL 2 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 AC012317.2-201ENST00000623305 2251 ntBASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 AC126763.1-201ENST00000552015 2118 ntBASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS1Q9Y6A9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 AL592295.1-201ENST00000400984 884 ntBASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms