Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 MIR4785-201ENST00000585005 73 ntBASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 AL049637.2-201ENST00000641778 930 ntBASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 AL031963.3-201ENST00000606441 850 ntBASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 TREX1-205ENST00000625293 1783 ntBASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 KRT8P20-201ENST00000423953 1409 ntBASIC19■□□□□ 0.63
PCDHB3Q9Y5E6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 TSPY7P-201ENST00000431358 1114 ntBASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 BX088651.1-201ENST00000540551 451 ntBASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 AL121906.2-201ENST00000621597 723 ntBASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB3Q9Y5E6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 AC093484.2-201ENST00000580996 2166 ntBASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 FAM210CP-201ENST00000445714 574 ntBASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 RARRES2P10-201ENST00000564312 460 ntBASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB3Q9Y5E6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB3Q9Y5E6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms