Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGC3Q9UN70 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 ABHD17AP1-201ENST00000358206 933 ntBASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC3Q9UN70 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 AL353708.3-201ENST00000610272 989 ntBASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC3Q9UN70 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 AC098590.1-201ENST00000468126 897 ntBASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC3Q9UN70 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 AL160286.2-201ENST00000567150 934 ntBASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms