Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 LINC01465-201ENST00000408887 1940 ntBASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 MIR1238-201ENST00000408483 83 ntBASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 AC211429.1-201ENST00000415277 523 ntBASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN1Q9UMX0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 AP000692.2-201ENST00000608391 879 ntBASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN1Q9UMX0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 AC008040.2-201ENST00000461049 708 ntBASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 LINC01023-201ENST00000606054 436 ntBASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 AC133561.5-201ENST00000635547 218 ntBASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN1Q9UMX0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 AL390955.1-201ENST00000428694 934 ntBASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 FAM207BP-201ENST00000447172 505 ntBASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 AC091390.4-202ENST00000476426 537 ntBASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 AP005242.2-201ENST00000580065 1175 ntBASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
UBQLN1Q9UMX0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBQLN1Q9UMX0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.83■□□□□ 0.93
UBQLN1Q9UMX0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms