Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 KRT18P16-201ENST00000510337 1294 ntBASIC19.64■□□□□ 0.73
HACD3Q9P035 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 RN7SL471P-201ENST00000580476 299 ntBASIC19.64■□□□□ 0.73
HACD3Q9P035 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.64■□□□□ 0.73
HACD3Q9P035 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
HACD3Q9P035 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.64■□□□□ 0.73
HACD3Q9P035 NBPF21P-201ENST00000425093 1451 ntBASIC19.64■□□□□ 0.73
HACD3Q9P035 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.64■□□□□ 0.73
HACD3Q9P035 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.64■□□□□ 0.73
HACD3Q9P035 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HACD3Q9P035 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HACD3Q9P035 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HACD3Q9P035 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HACD3Q9P035 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HACD3Q9P035 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.63■□□□□ 0.73
HACD3Q9P035 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HACD3Q9P035 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.63■□□□□ 0.73
HACD3Q9P035 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HACD3Q9P035 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HACD3Q9P035 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HACD3Q9P035 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.63■□□□□ 0.73
HACD3Q9P035 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HACD3Q9P035 AC239809.2-201ENST00000415381 517 ntBASIC19.63■□□□□ 0.73
HACD3Q9P035 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HACD3Q9P035 TUBB8P6-201ENST00000436895 1288 ntBASIC19.63■□□□□ 0.73
HACD3Q9P035 TSPY20P-201ENST00000450910 630 ntBASIC19.63■□□□□ 0.73
HACD3Q9P035 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.63■□□□□ 0.73
HACD3Q9P035 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.63■□□□□ 0.73
HACD3Q9P035 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.63■□□□□ 0.73
HACD3Q9P035 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.63■□□□□ 0.73
HACD3Q9P035 AC004264.1-201ENST00000608354 794 ntBASIC19.63■□□□□ 0.73
HACD3Q9P035 ITM2C-210ENST00000620962 501 ntBASIC19.63■□□□□ 0.73
HACD3Q9P035 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HACD3Q9P035 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HACD3Q9P035 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.63■□□□□ 0.73
HACD3Q9P035 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HACD3Q9P035 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HACD3Q9P035 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HACD3Q9P035 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.62■□□□□ 0.73
HACD3Q9P035 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.62■□□□□ 0.73
HACD3Q9P035 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.62■□□□□ 0.73
HACD3Q9P035 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.62■□□□□ 0.73
HACD3Q9P035 AC133681.1-201ENST00000465482 601 ntBASIC19.62■□□□□ 0.73
HACD3Q9P035 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.62■□□□□ 0.73
HACD3Q9P035 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.62■□□□□ 0.73
HACD3Q9P035 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HACD3Q9P035 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HACD3Q9P035 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.62■□□□□ 0.73
HACD3Q9P035 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HACD3Q9P035 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HACD3Q9P035 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.61■□□□□ 0.73
HACD3Q9P035 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HACD3Q9P035 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.61■□□□□ 0.73
HACD3Q9P035 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.61■□□□□ 0.73
HACD3Q9P035 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.61■□□□□ 0.73
HACD3Q9P035 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HACD3Q9P035 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HACD3Q9P035 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.61■□□□□ 0.73
HACD3Q9P035 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.61■□□□□ 0.73
HACD3Q9P035 AL023875.1-201ENST00000640777 796 ntBASIC19.61■□□□□ 0.73
HACD3Q9P035 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.61■□□□□ 0.73
HACD3Q9P035 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HACD3Q9P035 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HACD3Q9P035 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HACD3Q9P035 KRT8P8-201ENST00000434750 1448 ntBASIC19.6■□□□□ 0.73
HACD3Q9P035 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HACD3Q9P035 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HACD3Q9P035 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms