Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 TEX21P-204ENST00000641479 1693 ntBASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S4Q9NUP1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
BLOC1S4Q9NUP1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S4Q9NUP1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 GCSHP5-201ENST00000443090 522 ntBASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S4Q9NUP1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms