Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TREX1Q9NSU2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 KRT17P3-201ENST00000420566 1262 ntBASIC19.38■□□□□ 0.69
TREX1Q9NSU2 NBPF21P-201ENST00000425093 1451 ntBASIC19.38■□□□□ 0.69
TREX1Q9NSU2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TREX1Q9NSU2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 AL161938.1-201ENST00000569833 2180 ntBASIC19.37■□□□□ 0.69
TREX1Q9NSU2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TREX1Q9NSU2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TREX1Q9NSU2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TREX1Q9NSU2 ESRRAP1-201ENST00000400596 1257 ntBASIC19.35■□□□□ 0.69
TREX1Q9NSU2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms