Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 RARRES2P10-201ENST00000564312 460 ntBASIC20.74■□□□□ 0.91
CISHQ9NSE2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 HLA-A-209ENST00000638375 975 ntBASIC20.74■□□□□ 0.91
CISHQ9NSE2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.73■□□□□ 0.91
CISHQ9NSE2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.73■□□□□ 0.91
CISHQ9NSE2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CISHQ9NSE2 AC116562.4-201ENST00000641316 2276 ntBASIC20.73■□□□□ 0.91
CISHQ9NSE2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CISHQ9NSE2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.73■□□□□ 0.91
CISHQ9NSE2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CISHQ9NSE2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CISHQ9NSE2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CISHQ9NSE2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.73■□□□□ 0.91
CISHQ9NSE2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CISHQ9NSE2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.73■□□□□ 0.91
CISHQ9NSE2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CISHQ9NSE2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CISHQ9NSE2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CISHQ9NSE2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 AC104417.2-201ENST00000562989 1793 ntBASIC20.72■□□□□ 0.91
CISHQ9NSE2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 LINC01465-201ENST00000408887 1940 ntBASIC20.72■□□□□ 0.91
CISHQ9NSE2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CISHQ9NSE2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.72■□□□□ 0.91
CISHQ9NSE2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 NIFKP9-201ENST00000419265 221 ntBASIC20.71■□□□□ 0.91
CISHQ9NSE2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 AL353708.3-201ENST00000610272 989 ntBASIC20.71■□□□□ 0.91
CISHQ9NSE2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CISHQ9NSE2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CISHQ9NSE2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.7■□□□□ 0.91
CISHQ9NSE2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CISHQ9NSE2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CISHQ9NSE2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CISHQ9NSE2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.7■□□□□ 0.9
CISHQ9NSE2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CISHQ9NSE2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CISHQ9NSE2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CISHQ9NSE2 AL353807.1-201ENST00000427475 662 ntBASIC20.7■□□□□ 0.9
CISHQ9NSE2 AP002982.1-201ENST00000492365 877 ntBASIC20.7■□□□□ 0.9
CISHQ9NSE2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.7■□□□□ 0.9
CISHQ9NSE2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.7■□□□□ 0.9
CISHQ9NSE2 AF186192.3-201ENST00000583427 947 ntBASIC20.7■□□□□ 0.9
CISHQ9NSE2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms