Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 AC116562.4-201ENST00000641316 2276 ntBASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN4Q9NRR5 ZNF815P-204ENST00000434898 1737 ntBASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 C1QBPP2-201ENST00000528754 825 ntBASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN4Q9NRR5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 C1QL1P1-201ENST00000568105 661 ntBASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN4Q9NRR5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 Z82202.1-201ENST00000623446 1880 ntBASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 RPPH1-201ENST00000516869 333 ntBASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms