Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF4Q9NR80 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ARHGEF4Q9NR80 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF4Q9NR80 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.37■□□□□ 0.85
ARHGEF4Q9NR80 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
ARHGEF4Q9NR80 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 FAM210CP-201ENST00000445714 574 ntBASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 AC073195.1-201ENST00000607241 877 ntBASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 TFP1-202ENST00000475455 1573 ntBASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 AL020996.1-203ENST00000536896 2307 ntBASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 AC087289.5-201ENST00000586076 3175 ntBASIC20.36■□□□□ 0.85
ARHGEF4Q9NR80 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF4Q9NR80 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 AP002982.1-201ENST00000492365 877 ntBASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.34■□□□□ 0.85
ARHGEF4Q9NR80 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.33■□□□□ 0.85
ARHGEF4Q9NR80 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.33■□□□□ 0.84
ARHGEF4Q9NR80 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.33■□□□□ 0.84
ARHGEF4Q9NR80 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms