Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLRC4Q9NPP4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 HLA-B-256ENST00000639848 1089 ntBASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.03■□□□□ 0.96
NLRC4Q9NPP4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 AC083880.1-201ENST00000608266 535 ntBASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRC4Q9NPP4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NLRC4Q9NPP4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.02■□□□□ 0.95
NLRC4Q9NPP4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
NLRC4Q9NPP4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NLRC4Q9NPP4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.95
NLRC4Q9NPP4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NLRC4Q9NPP4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NLRC4Q9NPP4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 ZNF815P-204ENST00000434898 1737 ntBASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 PNMA6B-201ENST00000538162 1200 ntBASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 TEX21P-204ENST00000641479 1693 ntBASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 AL049812.1-201ENST00000432563 2267 ntBASIC21.01■□□□□ 0.95
NLRC4Q9NPP4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 AC060766.5-201ENST00000590539 871 ntBASIC21■□□□□ 0.95
NLRC4Q9NPP4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 AC092666.2-201ENST00000613287 246 ntBASIC21■□□□□ 0.95
NLRC4Q9NPP4 AL109923.1-201ENST00000618799 583 ntBASIC21■□□□□ 0.95
NLRC4Q9NPP4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 AL161938.1-201ENST00000569833 2180 ntBASIC21■□□□□ 0.95
NLRC4Q9NPP4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLRC4Q9NPP4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms