Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCM1Q9NP62 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCM1Q9NP62 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.6■□□□□ 0.25
GCM1Q9NP62 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCM1Q9NP62 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GCM1Q9NP62 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
GCM1Q9NP62 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
GCM1Q9NP62 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
GCM1Q9NP62 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.58■□□□□ 0.25
GCM1Q9NP62 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
GCM1Q9NP62 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GCM1Q9NP62 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 AP006294.2-201ENST00000641667 209 ntBASIC16.58■□□□□ 0.24
GCM1Q9NP62 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GCM1Q9NP62 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
GCM1Q9NP62 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.57■□□□□ 0.24
GCM1Q9NP62 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.57■□□□□ 0.24
GCM1Q9NP62 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GCM1Q9NP62 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
GCM1Q9NP62 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
GCM1Q9NP62 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
GCM1Q9NP62 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.57■□□□□ 0.24
GCM1Q9NP62 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GCM1Q9NP62 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.57■□□□□ 0.24
GCM1Q9NP62 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GCM1Q9NP62 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
GCM1Q9NP62 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.56■□□□□ 0.24
GCM1Q9NP62 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GCM1Q9NP62 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GCM1Q9NP62 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.56■□□□□ 0.24
GCM1Q9NP62 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
GCM1Q9NP62 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GCM1Q9NP62 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GCM1Q9NP62 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms