Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.33■■□□□ 1.01
VPS16Q9H269 AL137784.2-201ENST00000607332 1000 ntBASIC21.33■■□□□ 1.01
VPS16Q9H269 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
VPS16Q9H269 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.33■■□□□ 1
VPS16Q9H269 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.33■■□□□ 1
VPS16Q9H269 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.33■■□□□ 1
VPS16Q9H269 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VPS16Q9H269 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS16Q9H269 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.32■■□□□ 1
VPS16Q9H269 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.32■■□□□ 1
VPS16Q9H269 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS16Q9H269 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
VPS16Q9H269 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS16Q9H269 DUSP5P2-201ENST00000426873 1033 ntBASIC21.32■■□□□ 1
VPS16Q9H269 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.32■■□□□ 1
VPS16Q9H269 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.32■■□□□ 1
VPS16Q9H269 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS16Q9H269 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
VPS16Q9H269 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
VPS16Q9H269 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.32■■□□□ 1
VPS16Q9H269 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.32■■□□□ 1
VPS16Q9H269 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.32■■□□□ 1
VPS16Q9H269 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
VPS16Q9H269 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS16Q9H269 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.31■■□□□ 1
VPS16Q9H269 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.31■■□□□ 1
VPS16Q9H269 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.31■■□□□ 1
VPS16Q9H269 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
VPS16Q9H269 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.31■■□□□ 1
VPS16Q9H269 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.31■■□□□ 1
VPS16Q9H269 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.31■■□□□ 1
VPS16Q9H269 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.31■■□□□ 1
VPS16Q9H269 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
VPS16Q9H269 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS16Q9H269 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
VPS16Q9H269 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
VPS16Q9H269 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.31■■□□□ 1
VPS16Q9H269 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 ZNF815P-204ENST00000434898 1737 ntBASIC21.3■■□□□ 1
VPS16Q9H269 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
VPS16Q9H269 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.3■■□□□ 1
VPS16Q9H269 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.3■■□□□ 1
VPS16Q9H269 AC073210.2-201ENST00000430369 194 ntBASIC21.3■■□□□ 1
VPS16Q9H269 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.3■■□□□ 1
VPS16Q9H269 AC083906.2-201ENST00000511578 360 ntBASIC21.3■■□□□ 1
VPS16Q9H269 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
VPS16Q9H269 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
VPS16Q9H269 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS16Q9H269 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VPS16Q9H269 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VPS16Q9H269 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.29■■□□□ 1
VPS16Q9H269 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.29■■□□□ 1
VPS16Q9H269 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.29■■□□□ 1
VPS16Q9H269 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.29■■□□□ 1
VPS16Q9H269 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.29■■□□□ 1
VPS16Q9H269 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VPS16Q9H269 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
VPS16Q9H269 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
VPS16Q9H269 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.29■■□□□ 1
VPS16Q9H269 NEFHP1-201ENST00000412845 2629 ntBASIC21.29■■□□□ 1
VPS16Q9H269 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 AC141586.3-201ENST00000562166 1838 ntBASIC21.29■■□□□ 1
VPS16Q9H269 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS16Q9H269 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VPS16Q9H269 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 CROCCP3-202ENST00000420820 1947 ntBASIC21.28■■□□□ 1
VPS16Q9H269 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms