Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH23Q9H251 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDH23Q9H251 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH23Q9H251 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CDH23Q9H251 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH23Q9H251 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CDH23Q9H251 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDH23Q9H251 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDH23Q9H251 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
CDH23Q9H251 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH23Q9H251 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.69■□□□□ 0.9
CDH23Q9H251 AL662844.1-201ENST00000546340 181 ntBASIC20.69■□□□□ 0.9
CDH23Q9H251 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH23Q9H251 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH23Q9H251 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.69■□□□□ 0.9
CDH23Q9H251 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.69■□□□□ 0.9
CDH23Q9H251 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDH23Q9H251 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.69■□□□□ 0.9
CDH23Q9H251 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 AC092597.1-201ENST00000487352 616 ntBASIC20.69■□□□□ 0.9
CDH23Q9H251 BX640515.1-201ENST00000617215 977 ntBASIC20.69■□□□□ 0.9
CDH23Q9H251 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH23Q9H251 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH23Q9H251 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH23Q9H251 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.68■□□□□ 0.9
CDH23Q9H251 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CDH23Q9H251 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH23Q9H251 FP700111.2-201ENST00000619190 1892 ntBASIC20.68■□□□□ 0.9
CDH23Q9H251 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH23Q9H251 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH23Q9H251 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 SMG8-203ENST00000578922 2178 ntBASIC20.68■□□□□ 0.9
CDH23Q9H251 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 SLC25A1P1-201ENST00000528351 927 ntBASIC20.68■□□□□ 0.9
CDH23Q9H251 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH23Q9H251 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH23Q9H251 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH23Q9H251 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDH23Q9H251 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 AC022898.2-201ENST00000616822 1312 ntBASIC20.67■□□□□ 0.9
CDH23Q9H251 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDH23Q9H251 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH23Q9H251 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.67■□□□□ 0.9
CDH23Q9H251 AC117500.6-201ENST00000624871 588 ntBASIC20.67■□□□□ 0.9
CDH23Q9H251 AL391422.3-201ENST00000603791 2761 ntBASIC20.67■□□□□ 0.9
CDH23Q9H251 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH23Q9H251 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH23Q9H251 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH23Q9H251 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH23Q9H251 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH23Q9H251 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDH23Q9H251 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH23Q9H251 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDH23Q9H251 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.66■□□□□ 0.9
CDH23Q9H251 KRT8P41-201ENST00000533985 1514 ntBASIC20.66■□□□□ 0.9
CDH23Q9H251 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDH23Q9H251 Z98882.1-201ENST00000622160 2253 ntBASIC20.66■□□□□ 0.9
CDH23Q9H251 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CDH23Q9H251 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH23Q9H251 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH23Q9H251 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms