Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 AP005212.1-201ENST00000581547 1997 ntBASIC17.29■□□□□ 0.36
USB1Q9BQ65 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USB1Q9BQ65 GABARAPL3-202ENST00000624044 1851 ntBASIC17.29■□□□□ 0.36
USB1Q9BQ65 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.29■□□□□ 0.36
USB1Q9BQ65 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 HTR7P1-201ENST00000538670 1336 ntBASIC17.28■□□□□ 0.36
USB1Q9BQ65 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 AC073195.1-201ENST00000607241 877 ntBASIC17.28■□□□□ 0.36
USB1Q9BQ65 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 AC124283.5-201ENST00000624661 1809 ntBASIC17.28■□□□□ 0.36
USB1Q9BQ65 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 AC073314.1-201ENST00000568729 2216 ntBASIC17.28■□□□□ 0.36
USB1Q9BQ65 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.28■□□□□ 0.36
USB1Q9BQ65 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USB1Q9BQ65 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
USB1Q9BQ65 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USB1Q9BQ65 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USB1Q9BQ65 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
USB1Q9BQ65 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USB1Q9BQ65 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USB1Q9BQ65 YBX1P10-201ENST00000444752 975 ntBASIC17.27■□□□□ 0.36
USB1Q9BQ65 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 AP002982.1-201ENST00000492365 877 ntBASIC17.27■□□□□ 0.36
USB1Q9BQ65 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USB1Q9BQ65 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
USB1Q9BQ65 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
USB1Q9BQ65 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USB1Q9BQ65 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.27■□□□□ 0.35
USB1Q9BQ65 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USB1Q9BQ65 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USB1Q9BQ65 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USB1Q9BQ65 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USB1Q9BQ65 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.26■□□□□ 0.35
USB1Q9BQ65 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.26■□□□□ 0.35
USB1Q9BQ65 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
USB1Q9BQ65 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USB1Q9BQ65 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.26■□□□□ 0.35
USB1Q9BQ65 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.26■□□□□ 0.35
USB1Q9BQ65 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USB1Q9BQ65 PHGDH-210ENST00000641115 1638 ntBASIC17.26■□□□□ 0.35
USB1Q9BQ65 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms