Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3CQ99985 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3CQ99985 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA3CQ99985 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3CQ99985 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SEMA3CQ99985 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3CQ99985 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3CQ99985 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3CQ99985 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.7■□□□□ 0.74
SEMA3CQ99985 UBE2SP1-201ENST00000450587 669 ntBASIC19.7■□□□□ 0.74
SEMA3CQ99985 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA3CQ99985 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3CQ99985 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3CQ99985 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3CQ99985 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SEMA3CQ99985 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3CQ99985 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3CQ99985 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.7■□□□□ 0.74
SEMA3CQ99985 HTR7P1-201ENST00000538670 1336 ntBASIC19.7■□□□□ 0.74
SEMA3CQ99985 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SEMA3CQ99985 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA3CQ99985 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
SEMA3CQ99985 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3CQ99985 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3CQ99985 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3CQ99985 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3CQ99985 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3CQ99985 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3CQ99985 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3CQ99985 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3CQ99985 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.69■□□□□ 0.74
SEMA3CQ99985 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SEMA3CQ99985 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3CQ99985 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3CQ99985 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3CQ99985 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3CQ99985 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3CQ99985 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SEMA3CQ99985 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3CQ99985 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3CQ99985 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms