Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.42■□□□□ 0.86
SMOQ99835 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.42■□□□□ 0.86
SMOQ99835 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMOQ99835 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.42■□□□□ 0.86
SMOQ99835 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.42■□□□□ 0.86
SMOQ99835 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.42■□□□□ 0.86
SMOQ99835 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.42■□□□□ 0.86
SMOQ99835 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMOQ99835 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMOQ99835 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.42■□□□□ 0.86
SMOQ99835 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMOQ99835 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.42■□□□□ 0.86
SMOQ99835 FSCN1P1-201ENST00000568912 1481 ntBASIC20.42■□□□□ 0.86
SMOQ99835 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.42■□□□□ 0.86
SMOQ99835 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMOQ99835 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMOQ99835 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.41■□□□□ 0.86
SMOQ99835 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.41■□□□□ 0.86
SMOQ99835 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SMOQ99835 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SMOQ99835 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMOQ99835 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.41■□□□□ 0.86
SMOQ99835 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMOQ99835 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.41■□□□□ 0.86
SMOQ99835 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.41■□□□□ 0.86
SMOQ99835 AC130371.2-201ENST00000619443 611 ntBASIC20.41■□□□□ 0.86
SMOQ99835 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMOQ99835 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMOQ99835 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.41■□□□□ 0.86
SMOQ99835 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMOQ99835 ZNF815P-204ENST00000434898 1737 ntBASIC20.41■□□□□ 0.86
SMOQ99835 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMOQ99835 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.41■□□□□ 0.86
SMOQ99835 AC104417.2-201ENST00000562989 1793 ntBASIC20.41■□□□□ 0.86
SMOQ99835 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMOQ99835 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMOQ99835 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SMOQ99835 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.4■□□□□ 0.86
SMOQ99835 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.4■□□□□ 0.86
SMOQ99835 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.4■□□□□ 0.86
SMOQ99835 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SMOQ99835 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.4■□□□□ 0.86
SMOQ99835 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.4■□□□□ 0.86
SMOQ99835 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.4■□□□□ 0.86
SMOQ99835 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.4■□□□□ 0.86
SMOQ99835 AL158211.5-201ENST00000623583 2518 ntBASIC20.4■□□□□ 0.86
SMOQ99835 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SMOQ99835 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMOQ99835 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMOQ99835 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMOQ99835 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.39■□□□□ 0.86
SMOQ99835 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMOQ99835 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SMOQ99835 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMOQ99835 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.39■□□□□ 0.86
SMOQ99835 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SMOQ99835 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SMOQ99835 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.39■□□□□ 0.85
SMOQ99835 AC091390.4-202ENST00000476426 537 ntBASIC20.39■□□□□ 0.85
SMOQ99835 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
SMOQ99835 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMOQ99835 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.39■□□□□ 0.85
SMOQ99835 AP000525.1-201ENST00000608286 694 ntBASIC20.39■□□□□ 0.85
SMOQ99835 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMOQ99835 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMOQ99835 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.39■□□□□ 0.85
SMOQ99835 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMOQ99835 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SMOQ99835 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SMOQ99835 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.38■□□□□ 0.85
SMOQ99835 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
SMOQ99835 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SMOQ99835 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.38■□□□□ 0.85
SMOQ99835 KRT8P41-201ENST00000533985 1514 ntBASIC20.38■□□□□ 0.85
SMOQ99835 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.38■□□□□ 0.85
SMOQ99835 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMOQ99835 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 UNC93B2-201ENST00000285383 730 ntBASIC20.38■□□□□ 0.85
SMOQ99835 AC004951.3-201ENST00000418645 1148 ntBASIC20.38■□□□□ 0.85
SMOQ99835 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SMOQ99835 AC011298.2-201ENST00000617989 482 ntBASIC20.38■□□□□ 0.85
SMOQ99835 AC073912.3-201ENST00000624414 853 ntBASIC20.38■□□□□ 0.85
SMOQ99835 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms