Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCL13Q99616 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.28■□□□□ 0.2
CCL13Q99616 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL13Q99616 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL13Q99616 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL13Q99616 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
CCL13Q99616 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCL13Q99616 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL13Q99616 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCL13Q99616 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL13Q99616 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL13Q99616 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL13Q99616 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL13Q99616 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL13Q99616 HTR7P1-201ENST00000538670 1336 ntBASIC16.27■□□□□ 0.2
CCL13Q99616 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCL13Q99616 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCL13Q99616 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL13Q99616 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL13Q99616 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL13Q99616 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL13Q99616 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL13Q99616 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL13Q99616 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL13Q99616 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL13Q99616 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL13Q99616 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL13Q99616 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.19
CCL13Q99616 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL13Q99616 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.27■□□□□ 0.19
CCL13Q99616 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.27■□□□□ 0.19
CCL13Q99616 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
CCL13Q99616 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL13Q99616 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL13Q99616 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCL13Q99616 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CCL13Q99616 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL13Q99616 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
CCL13Q99616 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL13Q99616 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL13Q99616 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL13Q99616 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCL13Q99616 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL13Q99616 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCL13Q99616 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.25■□□□□ 0.19
CCL13Q99616 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCL13Q99616 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL13Q99616 C1QL1P1-201ENST00000568105 661 ntBASIC16.25■□□□□ 0.19
CCL13Q99616 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL13Q99616 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.25■□□□□ 0.19
CCL13Q99616 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL13Q99616 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms