Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 IL9RP2-201ENST00000423948 1312 ntBASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 Z85996.1-201ENST00000494644 937 ntBASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 TSPY19P-201ENST00000418461 509 ntBASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 TSPY18P-201ENST00000441642 509 ntBASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 AC092865.5-201ENST00000545435 363 ntBASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 AP002414.4-201ENST00000589764 1148 ntBASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD1Q96PZ7 BX119927.1-201ENST00000636596 1552 ntBASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 AC092329.2-201ENST00000598402 547 ntBASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD1Q96PZ7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 MIR1233-2-201ENST00000408138 82 ntBASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 MIR1233-1-201ENST00000408722 82 ntBASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 NEK4P2-201ENST00000580004 1012 ntBASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD1Q96PZ7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 ZNF444P1-201ENST00000559497 298 ntBASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 AC140113.3-201ENST00000605663 199 ntBASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 AC011298.2-201ENST00000617989 482 ntBASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms