Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.76■□□□□ 0.91
CASD1Q96PB1 AL031432.5-201ENST00000641059 760 ntBASIC20.76■□□□□ 0.91
CASD1Q96PB1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 KRT8P11-201ENST00000409686 1436 ntBASIC20.76■□□□□ 0.91
CASD1Q96PB1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.76■□□□□ 0.91
CASD1Q96PB1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.76■□□□□ 0.91
CASD1Q96PB1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CASD1Q96PB1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASD1Q96PB1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 AL441883.1-201ENST00000566170 1045 ntBASIC20.75■□□□□ 0.91
CASD1Q96PB1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 AL023973.1-201ENST00000624619 620 ntBASIC20.75■□□□□ 0.91
CASD1Q96PB1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.75■□□□□ 0.91
CASD1Q96PB1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASD1Q96PB1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.75■□□□□ 0.91
CASD1Q96PB1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASD1Q96PB1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASD1Q96PB1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 KRT8P45-201ENST00000414328 1447 ntBASIC20.74■□□□□ 0.91
CASD1Q96PB1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CASD1Q96PB1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 AL137060.1-201ENST00000618151 2648 ntBASIC20.74■□□□□ 0.91
CASD1Q96PB1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASD1Q96PB1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASD1Q96PB1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.74■□□□□ 0.91
CASD1Q96PB1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASD1Q96PB1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 AC140113.3-201ENST00000605663 199 ntBASIC20.73■□□□□ 0.91
CASD1Q96PB1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.73■□□□□ 0.91
CASD1Q96PB1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASD1Q96PB1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.72■□□□□ 0.91
CASD1Q96PB1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASD1Q96PB1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CASD1Q96PB1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASD1Q96PB1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASD1Q96PB1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASD1Q96PB1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASD1Q96PB1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.72■□□□□ 0.91
CASD1Q96PB1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.72■□□□□ 0.91
CASD1Q96PB1 HOMER2P1-201ENST00000455653 964 ntBASIC20.72■□□□□ 0.91
CASD1Q96PB1 FAM86EP-206ENST00000510506 987 ntBASIC20.72■□□□□ 0.91
CASD1Q96PB1 PRSS44-201ENST00000515154 1146 ntBASIC20.72■□□□□ 0.91
CASD1Q96PB1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.72■□□□□ 0.91
CASD1Q96PB1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.72■□□□□ 0.91
CASD1Q96PB1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CASD1Q96PB1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms