Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 AC121338.2-201ENST00000622535 1744 ntBASIC16.49■□□□□ 0.23
SPG11Q96JI7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 HBZP1-201ENST00000354915 429 ntBASIC16.48■□□□□ 0.23
SPG11Q96JI7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 FEM1AP4-201ENST00000443167 1987 ntBASIC16.48■□□□□ 0.23
SPG11Q96JI7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.48■□□□□ 0.23
SPG11Q96JI7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPG11Q96JI7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 AL671883.3-201ENST00000603274 991 ntBASIC16.47■□□□□ 0.23
SPG11Q96JI7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPG11Q96JI7 KRT8P41-201ENST00000533985 1514 ntBASIC16.47■□□□□ 0.23
SPG11Q96JI7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.47■□□□□ 0.23
SPG11Q96JI7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SPG11Q96JI7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.46■□□□□ 0.23
SPG11Q96JI7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.46■□□□□ 0.23
SPG11Q96JI7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPG11Q96JI7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.46■□□□□ 0.23
SPG11Q96JI7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SPG11Q96JI7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SPG11Q96JI7 AC133561.1-201ENST00000568600 2415 ntBASIC16.46■□□□□ 0.22
SPG11Q96JI7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SPG11Q96JI7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.46■□□□□ 0.22
SPG11Q96JI7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SPG11Q96JI7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SPG11Q96JI7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPG11Q96JI7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SPG11Q96JI7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SPG11Q96JI7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 FAAHP1-202ENST00000446499 1238 ntBASIC16.45■□□□□ 0.22
SPG11Q96JI7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.45■□□□□ 0.22
SPG11Q96JI7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.45■□□□□ 0.22
SPG11Q96JI7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SPG11Q96JI7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPG11Q96JI7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms