Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 TEX21P-204ENST00000641479 1693 ntBASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 SDHAP1-207ENST00000440850 2000 ntBASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM5Q96HC4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 AL020996.1-203ENST00000536896 2307 ntBASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM5Q96HC4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 AC004264.1-201ENST00000608354 794 ntBASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM5Q96HC4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 C1QL1P1-201ENST00000568105 661 ntBASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms