Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
DDX11Q96FC9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
DDX11Q96FC9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX11Q96FC9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DDX11Q96FC9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX11Q96FC9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DDX11Q96FC9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
DDX11Q96FC9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DDX11Q96FC9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX11Q96FC9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX11Q96FC9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX11Q96FC9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX11Q96FC9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 BX088651.1-201ENST00000540551 451 ntBASIC23.04■■□□□ 1.28
DDX11Q96FC9 MIR4785-201ENST00000585005 73 ntBASIC23.04■■□□□ 1.28
DDX11Q96FC9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 AL121829.2-201ENST00000620908 328 ntBASIC23.04■■□□□ 1.28
DDX11Q96FC9 AC113410.3-201ENST00000623366 203 ntBASIC23.04■■□□□ 1.28
DDX11Q96FC9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX11Q96FC9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX11Q96FC9 AC087289.5-201ENST00000586076 3175 ntBASIC23.04■■□□□ 1.28
DDX11Q96FC9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX11Q96FC9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX11Q96FC9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX11Q96FC9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX11Q96FC9 AP001271.2-201ENST00000624018 1556 ntBASIC23.03■■□□□ 1.28
DDX11Q96FC9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX11Q96FC9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
DDX11Q96FC9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX11Q96FC9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.03■■□□□ 1.28
DDX11Q96FC9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX11Q96FC9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX11Q96FC9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX11Q96FC9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
DDX11Q96FC9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX11Q96FC9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX11Q96FC9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX11Q96FC9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX11Q96FC9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX11Q96FC9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX11Q96FC9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.02■■□□□ 1.28
DDX11Q96FC9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.02■■□□□ 1.28
DDX11Q96FC9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX11Q96FC9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.02■■□□□ 1.28
DDX11Q96FC9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX11Q96FC9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
DDX11Q96FC9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
DDX11Q96FC9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.02■■□□□ 1.28
DDX11Q96FC9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX11Q96FC9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
DDX11Q96FC9 AC093484.2-201ENST00000580996 2166 ntBASIC23.01■■□□□ 1.27
DDX11Q96FC9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
DDX11Q96FC9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.01■■□□□ 1.27
DDX11Q96FC9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX11Q96FC9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 LINC01023-201ENST00000606054 436 ntBASIC23.01■■□□□ 1.27
DDX11Q96FC9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX11Q96FC9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX11Q96FC9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
DDX11Q96FC9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX11Q96FC9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX11Q96FC9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX11Q96FC9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX11Q96FC9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX11Q96FC9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23■■□□□ 1.27
DDX11Q96FC9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23■■□□□ 1.27
DDX11Q96FC9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX11Q96FC9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX11Q96FC9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
DDX11Q96FC9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX11Q96FC9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23■■□□□ 1.27
DDX11Q96FC9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23■■□□□ 1.27
DDX11Q96FC9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23■■□□□ 1.27
DDX11Q96FC9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
DDX11Q96FC9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX11Q96FC9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
DDX11Q96FC9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX11Q96FC9 AC124283.5-201ENST00000624661 1809 ntBASIC23■■□□□ 1.27
DDX11Q96FC9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms