Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC008622.2-201ENST00000617006 1229 ntBASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AC026396.1-201ENST00000419388 421 ntBASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AP003041.3-201ENST00000527151 707 ntBASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SNRNP40Q96DI7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 KRT18P38-201ENST00000449496 1282 ntBASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 AC069148.1-201ENST00000608741 768 ntBASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNRNP40Q96DI7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 AC007375.3-201ENST00000600936 2314 ntBASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 CLEC4GP1-201ENST00000596555 870 ntBASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 LINC01465-201ENST00000408887 1940 ntBASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.47■□□□□ 0.39
SNRNP40Q96DI7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 VENTXP5-201ENST00000523979 775 ntBASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.46■□□□□ 0.39
SNRNP40Q96DI7 CKBP1-201ENST00000565489 1086 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms